Shewanella violacea: SVI_3639
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Entry
SVI_3639 CDS
T01206
Name
(GenBank) hypothetical protein
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
svo
Shewanella violacea
Pathway
svo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SVI_3639
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
svo01007
]
SVI_3639
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_3639
Enzymes [BR:
svo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
SVI_3639
Amino acid related enzymes [BR:
svo01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SVI_3639
Transfer RNA biogenesis [BR:
svo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SVI_3639
Prokaryotic type
SVI_3639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BAJ03610
UniProt:
D4ZC65
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All DBs
Position
complement(4119157..4119654)
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AA seq
165 aa
AA seq
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MQVKSNFKPNVKCIDSVEVNCLDKQESVQITSDLSTKKEKVLTGDRATGQLHLGHYVGSL
QQRVKLQDMYHQTILVADMQGLTDNGHQPQKVASNILNVVADYLAVGIDPLKTRICLQSA
IPALAELTMYYSNLVSISRLERNPTVKNEIQSKSFGRSIPAGLLY
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaatcaaattttaagcccaatgttaaatgtatcgattcggtcgaagtaaac
tgtttggataagcaggaatcggttcagatcacaagcgatttaagcacgaagaaagagaag
gtccttacgggagatcgtgccacgggtcagttacatttaggccactatgttggctccttg
cagcagagagtcaaactgcaagatatgtatcatcagacgatcttagtggcagatatgcag
ggcttgaccgataacggtcatcaaccgcagaaagtcgcatcgaatattcttaatgtggtg
gcagattacctcgcggttggtatcgatcccctaaagaccaggatctgtctgcagtccgcc
atcccagctctggctgaacttaccatgtattattctaatctggtgtctatctccagatta
gagcgcaatcccacggtgaaaaatgagatccaatctaagtcattcggtcgcagtattcct
gcggggttattatactaa
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