Shewanella violacea: SVI_3651
Help
Entry
SVI_3651 CDS
T01206
Name
(GenBank) ribosomal pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svo03009
]
SVI_3651
Enzymes [BR:
svo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
SVI_3651
Ribosome biogenesis [BR:
svo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SVI_3651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAJ03622
UniProt:
D4ZC77
LinkDB
All DBs
Position
4132109..4132861
Genome browser
AA seq
250 aa
AA seq
DB search
MTQDKPSMRLAKYLAMTGLCSRKAATRYIRDGHITLDGRLANHIDTISLIESPSGLTSLE
ILKFDGVLIQGVESKQYWMLNKSVGTDCRLLAHDPSSLLHLLPDNPRLYPVGRLDKDSRG
QLILTNDGELTQQLMHPDFGHSKTYHVQVDGNFEDSFLIKMAQGVSYRDVTTLPCKMTRL
NDNKFEIILTQGLNRQIRRMSQALGYKVVDLKRVNIQSLALGDLKEGEMRQLTALEQALL
IESCRPSNEG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagataaaccaagtatgcggctggctaaataccttgccatgacaggactctgc
tcccgtaaggccgcgactcgctatattagagacggccatataaccctagatgggcgtctg
gccaatcatatcgataccatcagcttaatcgagagcccatcaggccttactagcctagag
atactcaaattcgatggagtgcttattcagggtgtcgaatctaagcagtattggatgctg
aataaatctgtcggcacagattgtcgcctcttggcccatgaccccagctctctgttgcat
ctattgcctgacaatccacgcctctacccagtgggccgtttagacaaggactcccgtggc
cagttgatattgaccaatgatggtgagcttacgcagcagttaatgcacccagatttcggt
catagcaagacttatcatgtacaagtcgatggcaatttcgaggatagtttcttaatcaag
atggcccaaggcgtcagctaccgagatgtcaccaccctcccctgtaagatgacccgcctt
aatgataacaagtttgagatcatactcacccaagggctcaaccgacagatccgccgcatg
agtcaggcattaggctataaggttgtcgaccttaaacgggtaaacattcaaagtttagcc
cttggcgatctaaaagaaggagagatgagacaactgacagctttagagcaggctcttctc
atagagagttgccgaccttcgaatgaaggttaa
DBGET
integrated database retrieval system
