Shewanella violacea: SVI_3678
Help
Entry
SVI_3678 CDS
T01206
Name
(GenBank) GGDEF domain protein
Organism
svo
Shewanella violacea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_8
HAMP
PAS_9
PAS_4
PriS_C
PAS
PAS_7
Motif
Other DBs
NCBI-ProteinID:
BAJ03649
UniProt:
D4ZCA4
LinkDB
All DBs
Position
complement(4161718..4162881)
Genome browser
AA seq
387 aa
AA seq
DB search
MSFIVHKALTSPLNRIINRFEEVKPGEDIKLTVPRFHQKDEIGSLVRGINSLVSSLNQSI
DSERNLRETTQVLEKKFRLIFEQASAGICLIDNDNLLVTANPAFQRIIYKSHTISDAIGL
RLTDWFYNKLQLESFLTDIRQSHNLDTVALDLKMKTLAGSPDCWVHCLFSKVLDDDMQSC
LMIEVLMYDVTERTEREINTRFEADHDGLTHLRNRRAGSRALIELFDRAEANDKIAVLMN
IDLDNFKIINDTNGHEAGDMVLIEIGRRMMAVFRNDDLCIRWGGDEFVVGCYFDSSRFEE
RSLPAIEKLASELRCVLNQDVKLSSGEDIKIGASIGIAMYPQHGDNLQSVLKAADNAMYV
SKQKGRNQYSIFDSNIMSEPDSCPKSE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttattgtccataaggcgctgacatcacctctgaatcggatcattaaccgtttc
gaagaggtgaaacccggtgaagatattaaattaacagtacctagatttcaccagaaggac
gagattggcagcttggtgagagggattaactctctggtctcatctctgaatcagtctata
gattctgagcgtaatttgagagaaacgactcaagtcttggagaagaaattcaggctcatt
ttcgaacaagccagtgctgggatctgccttatagataatgacaacttgctggttaccgct
aacccagcttttcagcgaattatctataaatcacatactatctcagatgccataggccta
aggctcacagattggttttacaataaactgcaattagagagctttcttacggatatcaga
cagagtcataacttagatacggttgccttagatcttaagatgaagaccctagcgggatcg
cccgattgctgggtacattgcttattttcaaaggtgttagatgacgatatgcagagctgc
ctgatgatcgaagtgctgatgtatgatgttaccgagcgaaccgagagggagatcaatacc
cgtttcgaagccgatcatgatggtttaactcatcttaggaacaggagagccggtagtcgg
gctctgattgagttatttgatagggctgaggcgaatgataagatcgctgtgctaatgaat
atcgatctggataatttcaaaataatcaacgataccaatggccatgaggctggggacatg
gtcttgatcgagatcggtcgccgtatgatggcggtgttcagaaatgacgatctgtgtatt
cgctggggaggtgatgagtttgtcgtagggtgttacttcgatagcagtcgattcgaggag
cgtagtctgccggcgattgagaaactggcctcggaactcaggtgtgtgttaaatcaagat
gtgaagctcagcagtggcgaagatattaagataggcgccagcataggcatcgccatgtat
ccgcagcatggggataatttgcagtctgtgttgaaggcggccgataatgccatgtatgtc
tcgaagcagaaagggcgtaatcaatatagcatcttcgattcaaatattatgagcgagcct
gattcttgccctaagagtgagtaa
DBGET
integrated database retrieval system