Shewanella violacea: SVI_3700
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Entry
SVI_3700 CDS
T01206
Name
(GenBank) HesA/MoeB/ThiF family protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_3700
Transfer RNA biogenesis [BR:
svo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SVI_3700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Pyr_redox_2
DAO
3HCDH_N
NAD_binding_7
UDPG_MGDP_dh_N
ELFV_dehydrog
Sacchrp_dh_NADP
ApbA
Motif
Other DBs
NCBI-ProteinID:
BAJ03671
UniProt:
D4ZCC6
LinkDB
All DBs
Position
complement(4190471..4191307)
Genome browser
AA seq
278 aa
AA seq
DB search
MDNRVLSEAYLNRFAGIGRLYGQKALVQFSQSHVAIVGIGGVGTWAAESLARSGIGEITL
IDLDDICVTNTNRQIHALKQTIGESKVEVMAQRILQINPECKVNQVEDFITTDNLGDYFI
GKKYAKEDQTDILDYVVDCIDAVKPKAAMIAWCKRQKLPLVTVGGAGGQVDPTQVQVIDL
AKTYQDPLLAKVRNLLRREYNFSKNLQRRFSIEAVFSTEQLVYPQADGSVCNSKANVDGS
MRMDCASGFGAVTVVTGTFGFVAASRVLTKLANKANHS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttggataatcgggtgctctctgaagcttatcttaatcgattcgcgggtattggccgtctc
tatgggcaaaaggccctagttcagttttctcaatcccatgttgccatcgtaggtataggt
ggcgtaggtacttgggctgccgagtctttggctaggagtggtataggtgaaatcactctc
atcgatctcgatgatatttgtgttaccaataccaaccgtcaaatacatgccctgaaacag
accataggcgaatctaaagttgaagtcatggctcaacgtattttgcagatcaatcctgag
tgcaaggttaatcaggtagaagatttcatcactacagataacctaggtgattatttcatt
ggtaaaaaatatgccaaggaagatcaaactgatattttagattatgttgtcgattgtatt
gatgcagtgaaacctaaggctgcaatgatagcttggtgtaagaggcagaaattgccctta
gtgaccgtgggtggtgcgggagggcaagttgacccgacacaagttcaagtgattgacctt
gccaagacatatcaggaccctttgctggctaaagttcgtaacttattgcggcgtgagtat
aatttttctaaaaatttacagcgacgtttcagtatcgaagccgttttctctacagagcaa
ctcgtctaccctcaggctgacggtagtgtctgtaatagcaaggcgaatgtagatggcagc
atgcgtatggattgcgcatcaggtttcggtgccgtgacagttgttaccggtacctttggc
tttgtggcggcgagtcgggttttgaccaagttagccaataaggctaaccactcctag
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