Shewanella violacea: SVI_3749
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Entry
SVI_3749 CDS
T01206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3749
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3749
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BAJ03720
UniProt:
D4ZCH5
LinkDB
All DBs
Position
4252264..4254321
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AA seq
685 aa
AA seq
DB search
MTLRLSIISLSIFSALFSSSHAFADDAGFEVIEVTGHHEGSYSSVAVDAVSPKVDISGLL
EKIPGAAVNGNGPLTGIAQYRGLYGNRVNTQVNGVSLASAGPNAMDTPLSYASLVNSERL
EMTRGIAPVSAGTDTIGGSVKVIESQASFDDVSGKVAAQYQDNGQRGHVGAKVNIGNQDH
ALLVYGDILKGDDNTTSGNGREISPTTYDKNMFGGQYRFNLGASSSDNESIAIGYQHVET
TEAGTPALPMDIDFIRSDRVKLEGVHDISDWELNWHLAYSDAEHGMDNFNQRMKMPSMNA
RYNSADSTSFDGQLSIAKDAWLFGLDTQLSEHNSVITDPTMAMFHVDNFNGVKNDTYTAF
AQWQLDVGQWNWQLGARVKHYITDADEVEHSMAGKKPAIKMLMDRYNNADRSQSQTGVDL
VLNTRYQVSNELSWILGLARKQASASYQQRYLWVPMQSTGGLADGRTYVGQMDLDLETAY
QVEVGADYANGDFSFSPRVFLHRIDNYIQGVAATNQAVIMAAKMMGDNNPMQFANVDAQL
LGMDLSAAYQLAESWSLDMNASYVSGERRDIEDNLYRIAPPKVILGLNYLSGSWLARVEA
LGVSAQNKVSETQLEETTAGYGLMNLSLAYDADSWMVKAGVNNLFDTEYEDHLAGYNRVM
GGDLMPGERMPGTGINAWLTGEYRF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgcgcttatcaattatctcactctcgatcttttcagctctattctcatcttcc
catgcgttcgccgatgacgctggcttcgaagttatcgaagtaaccggccatcatgaaggc
agctacagctcggttgcggtcgatgctgtatcgcctaaggtcgatatcagtggcctgctg
gaaaaaattcccggagccgccgtcaatggcaatggcccactcactggcatagcccagtat
cgcgggctctatggcaacagggttaacacccaagtgaatggcgttagcttagccagcgcg
ggacccaatgccatggatacccccttaagttatgcgagcttagtcaatagtgaacgtctc
gaaatgacccgaggcatagcgccggtttcagccggaaccgacaccataggcggcagcgtc
aaggtgatagagtctcaagccagtttcgatgacgtcagtggtaaagtcgccgcgcaatat
caagataatggtcaaaggggtcatgttggcgctaaggtcaatattggcaatcaagaccac
gccctactggtttatggcgacatacttaagggcgatgacaacaccacttctggcaatggc
cgcgagatctcaccaacgacctatgacaaaaatatgtttggcggacagtaccgcttcaat
ctaggtgcatcgagctcagacaatgagtctatagccataggctaccagcatgttgaaacc
accgaagccggcactccggctctgcctatggatatcgactttatccgcagtgacagagta
aagcttgaaggcgttcacgatatatcagactgggaactcaattggcacttggcctacagc
gatgccgagcatggcatggataatttcaaccagcgcatgaaaatgccctcgatgaatgcc
agatataacagcgccgatagcactagcttcgacggtcaattatctatagctaaagacgcc
tggttattcggacttgatactcagcttagcgagcataactcagtgatcaccgacccgacc
atggccatgttccatgtggataatttcaatggtgtgaaaaatgatacctacacagccttt
gctcagtggcagctagatgtcggccagtggaattggcaacttggtgcacgagtaaaacac
tacatcacagatgccgatgaagttgagcactctatggcggggaaaaaacctgcaattaag
atgctaatggacagatataacaatgccgaccgctcgcaatctcaaacaggcgtagatctg
gtactcaacactcgctatcaggtgagtaatgagctgagttggatcttaggcttggcccgt
aaacaggctagtgccagctaccaacagagatatctctgggtgccgatgcaatcaactggc
ggactggccgatggtcgtacctatgtcggccaaatggatctggatttagaaacagcctat
caagtcgaagtgggtgcagattatgccaatggcgactttagcttcagcccccgtgtgttc
ttacaccgtatcgacaattatattcaaggagtggcagcaacaaatcaggctgtgatcatg
gcagctaagatgatgggcgataataatcctatgcagtttgccaatgtcgatgcccagcta
ctcggcatggatcttagcgcagcttaccagctagccgaaagctggagcctagatatgaat
gccagctatgtcagcggcgagcgtcgtgacatagaagataacctctatcgcatcgctccg
cctaaggtcatccttggattgaattacctaagcggcagctggttagcacgagtcgaggcc
ctaggtgtcagcgctcagaacaaggtgtctgagacacaattagaggaaaccacagcaggt
tatggcttgatgaatctgtctcttgcttatgatgcagacagctggatggtcaaggcaggg
gtaaataacctgttcgatactgaatatgaagatcacttagccggttataaccgggtgatg
ggtggtgatttgatgccgggcgaacgcatgccaggtacaggcataaatgcttggctgacg
ggagaatacagattttaa
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