Shewanella violacea: SVI_3818
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Entry
SVI_3818 CDS
T01206
Name
(GenBank) toxin secretion ATP-binding protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
svo
Shewanella violacea
Pathway
svo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SVI_3818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3818
02044 Secretion system [BR:
svo02044
]
SVI_3818
Transporters [BR:
svo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SVI_3818
Secretion system [BR:
svo02044
]
Type I secretion system
Adhesin protein transporter
SVI_3818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
ATP-synt_ab
ABC_ATPase
RsgA_GTPase
MMR_HSR1
AAA
Pex24p
Motif
Other DBs
NCBI-ProteinID:
BAJ03789
UniProt:
D4ZCP4
LinkDB
All DBs
Position
4339084..4341204
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AA seq
706 aa
AA seq
DB search
MNSDPILAIVLIASQNLGLKINSEQVTSGLPLVKGKLTLDLIADAFINGGIEAAPQSLPI
KKMALPALVFNQQKQPFYLDSKDGSTLTLYDVEGQTLTLDMAEFKQRFLRDAWYLSRRAE
LDDRAKENSIQTSRHWLVAAFDEVKPFYMSFLLGSLAINILALVTPLFTMNVYDRVVPNQ
AMDTLWVLATGASIAIAFDWLLRQARTRLADVAGKEVDIRLSNLLFRKVLGMRLEHRPAS
SGAFAKQLQEFDSIREFITSATLVTAVDLPFTLLFLVLIAWLGGYMVLVPITCMVCLLVI
SFFMQKKLMASIEHSSKFSTQRQAHLIETLNMLVETKQNNGEAKAKHIWEDTIKNLADWQ
NESRIASNTLTHSVMNSQQLVTIGLILTGVYQIYAGNLSMGGLIAIVMLSGRASNAINQI
SMLLLKFKQTQSAIVAVDSILALPQEQNNNLTSSSKVPFDGSITLRSASFTYPDQPIPAF
NDLTVTIKPGERIGLLGPAGAGKSSLLAAIAGQYQLTSGQLFYNQLEARQWSTAKIRDHI
GYMSQQPNLVYGSVLDNLLFGLKKVDENLLAKTLLTTGIDKLMDRLGSGLDSQVGEFGRQ
LSGGQRQAISLGRALLRQPKLLLLDEPTSAMDERAENQIIACLRSQPRDCTMIISSHNPK
VLSICDRILVMDKGGLITEQTPMDMTNSLKRRIKAVTIRPKEEQAG
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtgatccaattttagctattgtcttaattgcgagccaaaatcttggattgaaa
ataaacagtgaacaagtcaccagtggcctgcctttagtcaaaggtaagctcactctagac
ttgatagccgatgccttcatcaacggcggaattgaggctgccccccagagcctgccaatc
aagaagatggctctgcctgcgctggttttcaaccaacaaaaacagcccttctatctcgat
agcaaagatggatcgacactgacgctctacgatgttgaaggacagacactcaccttagat
atggccgaatttaagcagaggtttcttcgtgatgcctggtatttatcacgtagggctgaa
cttgacgatcgagcaaaagaaaatagcattcagacatcgagacattggttagtagccgca
ttcgatgaggtaaagccattctatatgagcttcctgttaggatccctcgcgatcaatatc
ctagctctggtcactcccttattcaccatgaacgtgtatgacagagtcgtgccgaatcaa
gccatggacaccttatgggtgctggctaccggggcttcgattgcaattgccttcgactgg
ctgctcagacaggctagaactcgtctggcagatgtggcggggaaagaggtcgatatcagg
ctatctaacctactgtttcgtaaagttttgggcatgcgtctggaacataggcctgcctcg
tcgggggcctttgccaaacagttacaagagtttgacagcatccgagaatttatcacctcg
gccaccttagtgaccgcagttgacctgccattcaccttgttgttcttggtactcatagcc
tggctcggtggctatatggtacttgtgcctatcacttgtatggtgtgtttattggtgatc
agttttttcatgcagaagaaactcatggccagtatcgagcacagctcaaagttttcgacc
caacgtcaggcacacctgatcgaaaccctcaacatgttggtggaaactaaacagaataac
ggtgaggctaaggcgaagcacatctgggaagacaccatcaagaacttggccgattggcaa
aatgaatcccgcatcgcctctaataccttgacccatagcgtgatgaacagccagcaactg
gtcaccatagggcttattctcaccggtgtatatcagatctacgcaggcaacctgagcatg
ggcggactgatcgctatcgttatgcttagtggccgagcctccaatgccatcaatcagata
tccatgttattgctgaaatttaagcagacccagtctgcgatagtcgctgtggactccatt
ttagcgctacctcaagagcaaaataacaacttaacctcatcatcaaaagtccccttcgat
ggctctatcaccttacgttcggccagcttcacttacccggatcagccgatacctgcattc
aatgatttaactgtgaccatcaaacccggtgaacggataggcctcttaggtcccgcaggc
gccggcaagtcgagtctgctagcggcaatagccggacaataccagctgacttcgggacaa
cttttttacaatcaattggaagcccgccaatggtctacggcaaagatacgtgaccatatt
ggctatatgtctcagcaacctaatctagtctatggcagcgtgctggataatctacttttt
ggcctcaaaaaggtcgatgaaaacctgctggccaaaactctattaaccacgggaatagat
aagttaatggatcgtctcggcagtggactggatagccaagtgggtgaattcggacgccag
ctctccggaggtcagagacaggctatctcattgggtcgcgcactgcttagacaacctaag
ctgctactcctggatgaacccactagcgccatggatgaacgcgccgaaaatcaaatcatc
gcctgtcttagatctcagcccagagattgcaccatgatcatctcttcccacaaccctaaa
gtgctcagtatttgcgaccgcatcttagtgatggacaagggcggcttgatcacagagcaa
acaccaatggatatgactaattcacttaagcgtcgcattaaggcggtaacgattcgaccc
aaagaggagcaagcaggatga
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