Shewanella violacea: SVI_3824
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Entry
SVI_3824 CDS
T01206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3824
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3824
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BAJ03795
UniProt:
D4ZCQ0
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All DBs
Position
complement(4345653..4348358)
Genome browser
AA seq
901 aa
AA seq
DB search
MGDGSMKFNKVAKLVSLACGGVVALSAPTYAAEKDEDTVERIEVTGSRLKRVDMEGASPV
TTITAEDMATAGFATVGDALRSSSLNSFGSYGGTSNNSWSSQATIQLKGASASHTLTLLD
GKRMAKSPVLGGGATNINTIPTAAVERIEILTDGASAIYGTDAIAGVINIILKKDFEGVE
VKIRAEQPDADGGGDNHSASFTGGLSTDKGNLMFTIEHFKKSGIVMNERPYTAAHAIDGE
DPSVFQSWIGISPTGRTVNTGPNGGWENHAPFTNAGLDCADVYGDAFKGPLSDSDWAGES
YCGYDYTTSAYLDVDQERTSTLLNYTYNISDDIELTARAYWASNVTTDVSAPIPGTIRFD
EDMPAYTTAAGLDLRAVPEGGSMKYRFDTAGNRVRETTDSIYDFLVGLDGTTDSFDWNAS
ASYNRYDVFKWGTGYQLIGATTDLVGGWDDDTNSFEGWDPRDPNSEAPAGATANSDARLT
SSALEIDGGLSFELFELAGGATGLYVGASYREEKLDSQVDALDEAGLIAGGSGGAGGSGE
RDVKAIFMEMAFPVLDNLEVNLAARYDEYSDFGGTFNPQVSVRYNVLEPLLIRASWGTGF
RAPTLEDLNQSASVGVGTVTNYLKCYEDGMDIKGCQIENEIPISVNRNENLGPEESESYN
IGMVWDITDNFNMSVDYWSLETEGLIGSILNDEIVRAQAELWKAADEAGQPRPDISAIYP
GTSVSQDGSGKLSSVTNIKQNIGLSERQGIDAKFASTFETEMGDFKLGLAWSHYLKYTDS
SPEGGVQTISRNLSGTEYYPDDRVNFSANYLVGDHSLFYQADYIDHQSTDDENDNGSYHQ
IDSIVYHTLSYSYTMPWNNIVSAGINNLTDEEPSFRANGTYDSDTYDIIGRTYWVSFSQT
F
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
ttgggagatggaagtatgaagtttaacaaagttgctaagctagttagcttggcctgtggc
ggtgtagtagcactttctgcacctacatatgcagctgaaaaagatgaagatacagtagaa
cgcattgaagttaccggttcacgccttaagcgtgtcgatatggaaggcgcaagccctgta
accactattaccgctgaagatatggccaccgcaggttttgcaaccgtaggtgatgcactg
cgttcatctagcctaaactcgttcggttcttacggcggcacatcaaacaacagttggtca
tctcaagcgacgattcagcttaaaggtgcatcagctagtcacactcttactttgcttgat
ggcaaacgtatggctaagtctccagtcttaggcggcggcgcaactaacatcaacactatt
ccaactgctgcagttgaacgtatcgagattttaaccgatggcgcatcggcgatttatggt
accgacgcgattgccggcgttattaacatcatcttgaagaaagattttgaaggtgtcgaa
gttaagatacgcgccgagcagccggatgctgatggtggtggtgataaccactcggcatca
tttactggtggtctaagtacagataaaggcaacttgatgttcactatcgaacatttcaag
aagtctggaatcgtaatgaatgagcgcccatatactgcagcccatgctatagatggcgag
gacccaagcgtctttcaaagttggataggtataagtccaaccggtcgtaccgttaatacg
gggcccaatggcggctgggaaaaccatgctccattcactaatgctggcttagactgtgcc
gatgtttatggtgatgctttcaaaggacctttgagtgacagcgattgggctggagagtca
tattgtggttatgattatactacgtctgcataccttgatgtcgaccaagagcgcacttca
acgctacttaactacacctataacatcagtgatgatatagagctaacagcacgcgcctac
tgggcatcaaatgtcacgactgacgtatcggctcctattccaggaacaatcagattcgat
gaagatatgccagcttatactacggctgccggactcgaccttcgcgccgttcctgaaggc
ggctcaatgaagtaccgcttcgataccgctggtaaccgtgtacgtgaaactaccgatagc
atctatgatttcctggttggcctagatggtacaacagatagtttcgactggaacgcctca
gcatcatataacaggtatgatgtatttaagtggggaactggttatcaattgattggtgca
acgaccgatcttgttggcgggtgggatgatgatacaaactcattcgaaggttgggatcca
cgcgatccaaactcagaggctccagcgggcgcaaccgcaaactcagatgcacgtctaaca
agtagcgcattagagatagacggtggtctgagttttgaattgtttgaacttgctggcggc
gcaacaggtctgtatgtgggcgcatcataccgcgaagaaaaacttgactcacaggttgat
gcgcttgatgaagcaggcttaattgccggcggtagtggtggagccggtggtagtggtgag
cgtgatgtgaaagctatatttatggagatggctttccctgttctggataacttagaggtt
aatcttgctgctcgttatgacgaatactctgactttggcggcacgtttaacccacaagtt
tctgtgcgttataatgtgttagagcccttgttaattcgtgcatcttggggtacaggtttt
agagcaccaacgctggaagatttgaatcagtctgctagtgtgggtgttggcaccgtgact
aactatcttaagtgttatgaagatggaatggacatcaagggttgtcagatagaaaatgag
atccctatctctgtgaatcgcaatgaaaacttaggcccagaagagtctgaaagctataac
ataggcatggtgtgggatattaccgataacttcaacatgtctgttgactactggtcactg
gaaactgaaggcttaattggctcaatccttaatgatgaaattgttcgagctcaagccgaa
ttatggaaggctgctgacgaagcaggccaacctcgtccagatatcagtgctatttatcct
ggtacatcggtatcacaagatggctctggtaagctaagcagtgtcaccaatataaaacaa
aatatcggtctaagtgagcgtcaaggtatcgatgccaagtttgcgtctacctttgaaact
gaaatgggtgactttaaactgggtcttgcctggtcacattatctcaagtataccgattcg
agccctgaaggtggtgtacaaactatctctcgtaacttgagtggtaccgaatattatccg
gatgatcgcgtcaacttctctgcaaactatttagtgggcgatcatagcttgttctatcaa
gcagattatatcgatcatcagtctactgatgatgagaacgataatggttcttatcatcag
attgattcgatcgtatatcacacactaagttattcatacactatgccttggaataacata
gtttctgcgggtattaataacctgactgatgaagagccaagcttccgagcaaatggtaca
tatgacagcgatacatatgacatcataggacgtacttactgggtttcatttagccagaca
ttctaa
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