Shewanella violacea: SVI_3842
Help
Entry
SVI_3842 CDS
T01206
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
svo
Shewanella violacea
Pathway
svo00860
Porphyrin metabolism
svo01100
Metabolic pathways
svo01110
Biosynthesis of secondary metabolites
svo01120
Microbial metabolism in diverse environments
svo01240
Biosynthesis of cofactors
Module
svo_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SVI_3842 (hemD)
Enzymes [BR:
svo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
SVI_3842 (hemD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
SIS_2
Motif
Other DBs
NCBI-ProteinID:
BAJ03813
UniProt:
D4ZCR8
LinkDB
All DBs
Position
4369753..4370481
Genome browser
AA seq
242 aa
AA seq
DB search
MKILLTRPYGRNQLMVEALTSRSVSYLVAPLLQIEATPAKQQGDGMALFHHADIIIFIST
NAVNFATQAMKQAWPSETQFYAIGAATLNALAQLGISAQEAPQDCQQTEGLLTLPQLQSL
SNKKIVIVRGRGGREALASELIHRGGDVSYWEVYRRTCPRLSPQSNAQAWQQAKIDTIVI
TSGEILDNLIKLVPKELFAWLRACHIIVPSSRVQEQAVANGFQQVTNAKAANSKAILTAL
GL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattactgacccgcccatatggacgaaatcagttaatggttgaggcgctgaca
agcagaagcgtctcatatcttgttgcgcctttactgcagatagaagcgaccccggcaaaa
caacaaggtgacggcatggcgttatttcaccatgccgacatcatcatatttatcagcacc
aacgcagtaaattttgccactcaagccatgaagcaagcctggccttctgagacacagttt
tacgcaatcggtgcagcaactcttaatgcacttgcacaattgggcatttctgcccaagaa
gcacctcaagattgtcaacagaccgaaggtttactcactcttccccagctccaatctctt
tcgaacaagaaaatagtcatagtacgagggcgaggaggaagagaagcactggcaagtgag
ttaatccatagaggtggtgatgttagctactgggaagtttatcgcagaacctgcccaaga
ttatctcctcaaagcaacgcacaagcctggcaacaagccaaaattgacaccatagtcatc
accagtggcgaaattctcgataacctaatcaaacttgtaccaaaagagttatttgcttgg
ctgcgtgcatgtcatattatagtccctagctcacgagtacaggagcaggctgttgccaat
ggatttcaacaggttaccaatgcaaaggcggctaacagtaaggccatacttacagcttta
ggcttataa
DBGET
integrated database retrieval system