Shewanella violacea: SVI_3850
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Entry
SVI_3850 CDS
T01206
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_3850
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_3850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF908
MxiM
Motif
Other DBs
NCBI-ProteinID:
BAJ03821
UniProt:
D4ZCS6
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All DBs
Position
4403143..4403745
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AA seq
200 aa
AA seq
DB search
MKTFITLLAITLLSACSSIVTMDGNTTQVHDLNDMDKDGVIVARERCNDTLLGASIDNYG
CGKVKPIHDRSELKILFPNDSYYIDPMYYDQVEVIAVFMNDFPNTNVTIEGHCSKTGSYE
HNLALSQNRANAVTSLLAEHYSIASDRLTAIGYSYDRPVDESDTDMAHTRNRRVIAEVTG
EDTTPDMKWHIYTVDEEEVE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccttcatcacgcttttagccatcactctactaagtgcatgctccagcatagtg
actatggatggcaatacgacccaggttcacgatcttaacgatatggacaaagatggtgtc
attgtcgcccgcgaacgctgtaacgatacccttctgggagccagtattgataattatggt
tgcggcaaggttaagccgatccacgatcgttctgaactcaaaatattattccccaacgac
tcctactacatagaccctatgtattacgatcaagttgaagtgattgcggttttcatgaat
gacttccccaatacgaatgtcaccatagaaggccattgtagtaagactggatcctatgag
cacaatttagccttgtcgcaaaatagagccaatgcagtcacctcgctattagccgaacat
tatagtattgcatccgataggctaaccgcgataggttatagctatgatcgccccgtagat
gagagtgataccgatatggcccacactcgaaataggcgcgttattgccgaagtaaccgga
gaagatacgacgccagatatgaaatggcatatctatacggttgatgaagaagaagtggaa
tag
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