Shewanella violacea: SVI_4008
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Entry
SVI_4008 CDS
T01206
Symbol
pilQ
Name
(GenBank) type IV pilus biogenesis protein PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
svo02044
]
SVI_4008 (pilQ)
02035 Bacterial motility proteins [BR:
svo02035
]
SVI_4008 (pilQ)
Secretion system [BR:
svo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
SVI_4008 (pilQ)
Bacterial motility proteins [BR:
svo02035
]
Pilus system
Pilus assembly proteins
SVI_4008 (pilQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
BAJ03979
UniProt:
D4ZDR8
LinkDB
All DBs
Position
complement(4581948..4583879)
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AA seq
643 aa
AA seq
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MDVKFHSVVDHQLELQLIFEHEVMAPEIDLNASPALITLGFSDSISGLEKETMPINTVGV
ESISVHQVDGMMRVMVALNKVKAYKGKLKGNTYNLTINDEVADRNATAENPFINGIKNID
FRRTSAGGGELLVKLSNSSVAANVKQVGSKLELQLYNTDIASDLLYVMDVQDFATPVRSF
ETFKEELTTRILIDISGQYEYNYKQEGSLFRLSISKAERLAVSKQEKKYNGRSLSLNFQS
ISVRTVLQIIADYNDFNLVTSDTVEGEITLRLDDVPWDQALDLILQTKGLGKRIEGNILM
IAPSEELAIRESQQLKNQLEVQELAPLYTEYLQINYAKAADIAELLKGEDSSLLTSRGSA
TVDERTNTLLVKDTEDTLENIHRLIEVLDIPIRQVLIEARMVTVKDNVSEDLGIQWGITD
QQGTRGTSGSIEGAESIAGGLIPALADRLNVALPAPAGAASIAFHVARLADGTILDMELS
ALEQENKGEIIASPRIMTSNQKAAYIEQGVQIPYVESSSSGAATVSFKKAVLSLRVTPQI
TPDNRVILDLEITQDSQGEVVATPLGEAVSIDTQRIGTQVLVNHGETIVLGGIYQQNLIS
RVSKVPILGDIPFLGFLFRSTSDKNERQELLIFVTPKIISEDL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtggatgttaaattccactcagttgttgatcatcaattagaactgcaattaatcttcgaa
catgaagtaatggcaccagaaatcgatctcaatgcatcaccagctttaattaccttaggt
tttagtgacagtatctctggattagaaaaagagactatgccaattaatactgtcggagtt
gaaagcataagcgtgcatcaggttgatggcatgatgcgggtgatggtagcgctaaataag
gtcaaagcctataagggcaagcttaaggggaatacctataatctgacgataaatgatgag
gtcgccgatcgtaatgcaactgcagaaaatccatttattaacgggattaaaaatatagat
ttcaggcgaacttctgctggcggcggagaactattggttaagctaagcaatagttcggta
gcagctaacgtgaagcaggtcggttctaagttagagctgcagctttataataccgatata
gcttctgaccttctgtatgtgatggatgtgcaagattttgcaactccagtgcgtagcttt
gaaacttttaaagaagagctaacgacgagaatacttatcgatatctcgggtcaatatgaa
tataactacaaacaagaaggcagtctgttccgcctcagtataagtaaggctgagaggctg
gccgtaagcaaacaggagaagaaatataatggacgttcactttctctaaacttccaaagt
atctcggtgagaaccgtattacagatcatcgcggattataacgattttaacttagtcacc
agtgataccgtcgaaggggagattaccctgcgtctggatgatgtcccttgggaccaagct
ctggatcttatcttgcagactaaaggtctgggtaagcgcatcgaaggtaatattcttatg
atagcgcccagtgaagagctagcgattcgtgagagccagcaattaaaaaatcagttagaa
gtgcaagagcttgctcctctatatactgaatatctgcagataaattacgccaaagcagcc
gatatcgctgaattgttgaagggtgaagattcgagcctgctgacttcccggggaagtgct
actgtcgatgagcgtaccaataccctattggtaaaagataccgaagacacgttagagaat
atacacaggctaatcgaggtattggatatacccattcgtcaggtactcatcgaggcccga
atggtgacagtaaaagataatgtctcagaagaccttggcattcagtgggggatcacagat
caacaaggtaccagagggacatcggggagcatcgaaggtgcagagagtatcgctggtgga
ttaataccagcccttgctgaccgattaaatgtagccttaccagctccagccggtgctgca
agtatcgcgtttcatgtggccagactggcagatggcaccatactagatatggaactaagc
gccctagagcaagaaaataagggagagatcatcgctagcccgcgtattatgacctcgaat
cagaaggctgcatacatagagcaaggtgtacagatcccttatgtcgagtctagctccagt
ggtgcagcaacggttagctttaagaaggccgtgttgtcgttgcgagtcacaccgcaaatt
actccggataatcgtgtaattctggatttagagatcactcaggattctcaaggagaggtg
gttgcaactcctcttggagaggctgtttctatcgacacccaaagaatcggtactcaggtg
ctggtgaatcatggcgaaacaattgttttaggtggtatttatcaacaaaacttgattagc
cgtgtcagtaaagtacctatattgggtgatattcccttcttaggttttctttttaggagc
acttctgacaagaatgaaaggcaagaactcttaatttttgtcacgccaaagataatatct
gaagatctataa
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