Shewanella violacea: SVI_4037
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Entry
SVI_4037 CDS
T01206
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
svo
Shewanella violacea
Pathway
svo00300
Lysine biosynthesis
svo00550
Peptidoglycan biosynthesis
svo01100
Metabolic pathways
svo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SVI_4037 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SVI_4037 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SVI_4037 (murF)
Enzymes [BR:
svo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
SVI_4037 (murF)
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAJ04008
UniProt:
D4ZDU7
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All DBs
Position
complement(4631378..4632745)
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AA seq
455 aa
AA seq
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MIPLNLSGICQRLNARLVGADVEFCHVSSDSRAIPEQTLFVALKGDKFDGHNFANTAVEN
GAIALLVDHELPLNITQVIVKDTQRAMGELGAYLKELIQPRSVALTGSNGKTSVKEMVAT
ILSQRHKVLYTAGNFNNEIGVPLTLLRLEADDEFGVFELGANHKGEIDYTSSLVKPDVAL
VNNVASAHLEGFGSLEGVASAKSEIFNHLTPTGTAIINADDGFASVMLAASTDYTQLTFG
IDSAADIQASDLEADPMGCYRFKLSYLRETLLIALPLPGRHQVSNALAATAICLSFGLTL
DEIKLGFSLLVPVKGRMLPTQLGRVRVIDDSYNANPASVTAAVDWLHEIEGHRCLVLGDL
GELGDNAPLLHTELGELARQKGLDSLLTLGELSANASSAFGVDGYISLELLLEDLIKNIK
QLQGNVTVLVKGSRSARMERVVEALILAYGRREFV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgatcccattgaatttgtcgggtatatgtcagcgcctgaatgccaggttagtgggcgcc
gacgttgagttttgtcatgtttccagtgacagccgggctatccctgagcaaactctattt
gtcgccttgaaaggcgacaaattcgatgggcataattttgctaatacggcagtggaaaat
ggcgccatagccttgttggtcgatcacgagttaccactgaacattactcaagtgatcgta
aaggatacccagagagcgatgggagagttgggggcttatttaaaagaacttattcagccc
agatccgtcgcgttaaccggttcaaatggcaagaccagcgttaaagagatggtggctacc
atcttatctcaacggcataaggtcttgtataccgcgggtaattttaataatgaaataggt
gttcctctaacactattacgcttagaggccgatgatgaatttggcgtgttcgagttaggc
gcgaatcacaagggtgagatagattatacatcttccttagtaaagcctgatgtagcctta
gtcaacaatgtagcttcggcgcacctagagggttttggctctcttgaaggcgtagctagt
gccaagtctgaaatatttaatcatctaacacccacagggacggcaattatcaatgccgac
gatgggtttgcgtcagtcatgctggcggcatcgaccgattacactcagctgacgtttggt
attgattctgcagctgatattcaagcatcagatcttgaagccgatcctatggggtgttac
cgctttaaactcagttacttacgagagacgcttttaatagctttaccgcttccagggcgt
catcaagtgagtaatgccctggctgctactgccatctgtttatcatttggattaacgcta
gatgaaataaaattaggcttctcacttctggtgccagtcaagggtagaatgctacccact
caattggggcgggtgcgtgtgatcgatgatagttataacgcaaatcctgcttctgttacc
gcagcagttgactggcttcacgaaattgaaggtcatcgctgtttagtgctgggtgatttg
ggcgaattgggcgacaatgcgccccttttgcacacagaactaggcgaattggcaaggcaa
aaaggcttggattcactattgaccttaggtgaactcagtgccaatgcgagtagtgccttt
ggtgtcgatggttatattagcctagaacttttgctagaagatctaataaaaaatattaaa
cagttacaaggtaatgtgactgttttggtcaaaggatcacgtagcgccagaatggagcgt
gtggtcgaagctttaatacttgcctacgggcgcagggagtttgtttaa
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