Shewanella violacea: SVI_4182
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Entry
SVI_4182 CDS
T01206
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svo03016
]
SVI_4182 (trmA)
Enzymes [BR:
svo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SVI_4182 (trmA)
Transfer RNA biogenesis [BR:
svo03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SVI_4182 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_4
Methyltransf_25
MTS
Methyltransf_31
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
Methyltransf_11
TehB
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BAJ04153
UniProt:
D4ZE92
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All DBs
Position
4785933..4787030
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AA seq
365 aa
AA seq
DB search
MNLAAMDPTTYDAQLEEKRIKLEQIFTDFDTPRLETFGSETANYRMRCEFRIWHDGDDMY
YYMFDKALDSKVRCDQFLPASSLINEMMPALIEELKPNTILRHRLFQIDFLSTLSGEILV
SLLYHKQLDQEWEAEAKSLKDRLASKFKVNLIGRARKQKLIFDKDFVVETLSVNGEQLHY
HQIENSFTQPNGKVSVKMLEWAIDVTKNSTGDLLELYCGNGNFSIALAQNFDRVLATELA
KPSVQSAQYNIEINNIDNLQIIRMSAEDFTDAMAKKRSFRRLEGIDLDSYNCNTIFVDPP
RAGLDSNTVKLVQGYERIVYISCNPNTLIENLTELTKTHKITRFALFDQFPYTDHMESGV
FLEKK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcagcaatggatcctacgacctatgatgcccaactcgaagaaaagcgcatc
aagctggaacaaatattcaccgactttgatacaccaaggttagaaaccttcggctcagaa
acagcgaattatcgtatgcgttgtgaatttcgaatttggcatgacggtgatgacatgtat
tactacatgtttgataaagctctggacagtaaggttcgttgcgaccaattccttccagca
agcagtctgattaacgagatgatgcctgccttaatcgaagaattaaaacctaataccata
cttaggcatagattgtttcaaatcgactttctttcaactctaagtggcgaaattcttgtt
tccttactttaccataagcaattggatcaagagtgggaagcagaagctaagagccttaaa
gatagattagcgtctaaattcaaggttaatttgatcggtagagcccgtaagcagaaactt
attttcgataaagatttcgttgtggaaacccttagcgttaatggtgagcagcttcattat
caccaaatcgaaaatagcttcactcaacctaatggtaaagtttcggtaaaaatgctcgaa
tgggccatagatgtcaccaagaacagtaccggcgacttattggagctttattgtggtaac
ggtaacttttctatcgctttagcgcaaaacttcgatcgcgtcctcgccactgaactagca
aaaccttcggttcaatcggcgcaatacaatatagaaatcaacaatatagataatttgcag
ataatacgtatgtctgccgaagacttcaccgatgctatggcgaaaaagagaagttttaga
cgcttagaaggtatagatctagacagctataattgtaataccatctttgtcgatccacca
cgagctggcctagattcgaatacggtcaagctagttcaaggttatgagcgtatcgtttac
atatcatgtaaccctaatactttgatcgaaaacttaaccgagctaactaaaacacataag
atcactcgcttcgccctatttgatcaatttccatatacagaccatatggaatcaggtgtc
ttcttagagaagaagtaa
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