KEGG   Shewanella violacea: SVI_4201
Entry
SVI_4201          CDS       T01206                                 
Symbol
gspD
Name
(GenBank) general secretion pathway protein D
  KO
K02453  general secretion pathway protein D
Organism
svo  Shewanella violacea
Pathway
svo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:svo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SVI_4201 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:svo02044]
    SVI_4201 (gspD)
Secretion system [BR:svo02044]
 Type II secretion system
  General secretion pathway protein
   SVI_4201 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: BAJ04172
UniProt: D4ZEB1
LinkDB
Position
complement(4804753..4806891)
AA seq 712 aa
MNNKSFRRKLIAGLVMGAALLTPTLAWSEQYAANFKGTDIQEFINIVGKNLNRTIIVDPT
VRGKINVRSYDLLDDEQYYQFFLNVLQVYGYAVVEMDNNIIKVIKDKDAKTASIRVADDD
TPGVGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVVNYDPSNVLMISGRAAVVNKL
VEIVRRVDKQGDTEVKVVPLNFASAGEIVRIIETLNRVTGNKSQSSQAPKVVADERMNAV
IVSGDVKGRQRVVELIRKLDAEQASTGNTKVRYLRYANAEDLVEVLMGLADQLSSDKDGG
GKPGGNKRRKDINIMAHAETNALVITAQPDQMRTIDSVINQLDIRRAQVLVEAIIVEVAE
GDDVGFGIQWATASGGGTQFNNLGPTIGEIGAGVWLAKDQKASQTCTGSGDNKTCTDNPD
TPGDITLLAQALGKVNGMAWGVATGDFAALIQAVSSDTKSNVLATPSITTLDNQEASFIV
GDEVPILTGSQSSSNGNENPFTTVERKEVGVKLKVIPQINEGSSVKLTIEQEVSGINGKT
AVDVTFATRRLTTTVMADSGQIVVLGGLINEEVQESVQKVPFLGDLPLIGHLFRSSSSSK
KKKNLMIFIKPTIIRDGITMEGIAGRKYNYFRALQLEQQERGINLMPNTDVPILEEWNQS
EYLPPEVNDILQRYKEGKGLETRMRKTDPALKSISESKEHDKSLDTDDNADE
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgaataataagagttttcgcagaaaattaattgcaggacttgtgatgggagccgctctt
ttaactcctacacttgcttggtcagagcaatatgcggctaattttaaaggaactgatatc
caggaatttatcaatatcgttggtaaaaacctcaaccgtaccattattgtcgatcccacg
gttcgcggtaagatcaatgtccgcagctatgatctactcgatgatgagcaatattatcaa
ttcttcctcaatgtgctgcaggtctatggttatgccgtcgtagagatggataacaatatc
atcaaggtgatcaaagataaggatgctaaaacagcatctattcgtgtggctgatgatgat
actccaggtgttggcgatgagatggtgactcgcatcgtggccctatacaacacggaagcg
aaacaacttgcccctctgctacgtcagcttaatgataatgccggcggcggtaacgtagtt
aactatgatccatcgaatgtcttgatgatctctggtcgcgcggccgtggtaaacaagctg
gtcgaaattgttcgtcgcgtcgacaagcaaggcgataccgaagtgaaggtggtccccctc
aactttgcatctgccggtgagatagttcgtatcatagagaccttaaatcgtgtaactggc
aacaagtctcagtcgagtcaggcgcctaaagtggttgccgatgagcgtatgaatgccgtg
attgtcagtggtgatgtgaagggccgtcaacgcgtggtcgaattaatcaggaagctagac
gcggagcaggccagtacaggtaatactaaggttcgctatctgagatatgccaatgcagaa
gatcttgtcgaagtattgatgggcttagccgatcagctgtccagcgataaagatggtggt
ggtaagccaggtggtaataaacgccgtaaagatatcaatatcatggcccatgccgagacg
aatgcccttgttattacggcgcaaccggatcagatgcgcaccatagatagcgtgatcaat
cagctggatattcgtcgtgctcaggtattagtcgaggcgataatcgttgaagtggccgag
ggcgatgacgttggtttcggcatccagtgggctacggcatcgggtggtggtactcagttt
aataacttaggcccgacaattggtgagattggtgccggtgtctggttggccaaggatcag
aaagcctcacagacatgtacaggttcaggcgacaataaaacctgtaccgataacccggat
actcccggtgacatcacactgttagcccaagcgttgggtaaagttaatggtatggcctgg
ggagtggccacaggtgacttcgcagccttgattcaggcggtatctagcgataccaagtca
aatgtattggcgacaccttctatcacgactctagataaccaggaagcctcatttatagtg
ggtgacgaggttcccattttaaccggtagccagagttcgagtaatggcaacgaaaaccct
ttcactaccgtcgagcgtaaagaggtgggggtaaagttaaaagttattccccagattaac
gaaggcagctcagttaagctgactattgagcaggaagtttcgggtatcaatggtaagact
gctgtcgatgttacctttgcaacccgtcgtttgaccactactgtgatggctgactcgggt
cagattgtcgtcttaggtggcctgatcaacgaagaggtgcaggagagtgtgcagaaggta
cctttcctcggtgatttaccgctaattggccatctgtttaggtcttcatctagcagtaag
aagaagaaaaacctgatgatattcatcaagccaaccattattcgtgatggcatcacaatg
gaaggcatagcaggtcgcaagtataactatttccgtgcgctgcagttagagcagcaagag
cgaggcattaatctgatgccgaataccgatgtgcctatactcgaagagtggaaccagtct
gaatacctgccgcctgaggtcaatgatattctacagcgctacaaagagggtaaaggtctg
gagacaagaatgcgtaagacagaccctgcccttaagagcatctccgagagcaaggaacac
gataagtctctagatactgatgataacgccgatgagtaa

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