Shewanella violacea: SVI_4210
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Entry
SVI_4210 CDS
T01206
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_4210
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_4210
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BAJ04181
UniProt:
D4ZEC0
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Position
complement(4814380..4816533)
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AA seq
717 aa
AA seq
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MDHNVKLSMIGLAVVAALTAGSALAQQEAVNTSDADNVEHILITASPFAQKLSDTPNSVF
IVSQQDLDLQRVVARNLSEIISNLVPGFSPSTETMSTFGQNFRGGKAIVMIDGVLISTTL
RAGGRDLQSISVDVIQSIEVIKGASAMYGNGEAGAIINVITKKPTANFEMQTSVGVEAFS
DELSDAGYSISQTFSGTTESDLGYLLNLSGKDRGNLYDSNGNQLPGAPNSQGGMGDADEY
DVLVKLDQEMDSSRVALLAHHYKIENKLHYKRSVNDDNGLVEIDETQPYSGPNPTTELST
VQVTYDHDDVFGQQLSLSAYMSKVNVGYESGSEIVSDRSGFKAAMQWTIDNRSRLVYGFE
YGKDNTEQGRDRDVILSLDVNGVPITESQYICSVCDLTETKLSPFAQYWNQITEDLTLQI
GLRYENFEIEVPDYQRYKRGILSEKQGDTLKYHKPLVNLGLVYSLSDSSDIFASFSQGYS
HADMRMLRDMPVDSVTEFSDDIPATQTNYYETGLRFKNQDLQGSLSFFYSDINDGYAYDY
NVDALIAKRVAAVVVADEKVWGFEATLDYRLNEAIKIGTSVSQSEGKRTNSETGVDYWMN
GTKITPIKASAYADYRFNDMASVRMQVNYVGDRDKNDRESEAGYSYYESPYDGYTLVDLI
STFDTDYGRFTLGIDNLLNADYQPLVSQMNKEVVWEKYRNQFSGYGRRLALEYSVNY
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaccataacgtgaaattaagtatgatagggctagccgtagttgcagcactgactgca
ggctcggctcttgcacagcaagaagcggtaaatacatctgatgctgacaatgtcgagcac
atcctgatcaccgcatctcctttcgcacagaaactcagtgatactcctaattcagttttt
atcgtgtctcagcaagatttagatcttcaacgagttgtcgcacgtaacctctcagaaatc
atttcgaatctagttcctggcttctctccaagtaccgaaactatgtcaacctttgggcag
aacttccgtggtggtaaagccatagtgatgatcgatggtgtgctgatctcaacgactttg
agagctggtggccgtgatctacagtcaatctcagtggatgtgattcagagcatagaagtg
atcaagggcgccagcgccatgtatggcaatggtgaggcgggtgccatcatcaatgtgatc
accaagaaacctacggctaacttcgagatgcaaactagtgtgggagtggaagctttttcc
gatgagctatccgatgctggttatagtatatcccagaccttctcgggcactacagagtca
gatctaggctatttgttgaacctatcgggtaaagaccgcggtaacctatatgattctaac
ggtaaccagctccccggcgcgcctaatagccaaggtggtatgggtgatgcggatgagtac
gatgtattagttaaactagatcaagagatggactccagtcgtgtagccctgctagctcat
cactacaagatagagaacaagttgcattataaacgtagtgttaacgatgataatggactg
gtcgaaatcgatgagactcagccatatagtggacccaacccaacgacagagctaagcaca
gtacaagttacctatgatcatgatgatgtatttggccagcaattaagtctttcggcttat
atgagtaaggtcaatgtaggctatgagtctggctccgaaattgtctccgacaggagtggt
ttcaaggctgctatgcagtggaccatagataatcgcagccgcttagtctatggattcgaa
tacggtaaggataataccgagcaaggtagagatcgtgatgtcattctaagcttagacgtt
aacggtgttcccataactgaatctcaatatatctgctctgtgtgcgatcttactgagact
aagctgagcccgtttgcccaatactggaaccagatcaccgaagatctgactctacaaatt
ggtctgcgctatgagaacttcgagattgaagtgcctgattatcaaagatacaagagaggg
attcttagtgagaaacaaggtgataccttaaagtaccataagcccttggttaatttagga
ctggtatatagcttgagtgactctagcgatatttttgccagtttctctcaaggctattct
catgctgatatgcgtatgttgagagacatgccggtggacagtgttactgagttttccgat
gatatcccagctacacaaacaaactactatgaaacgggtttacgcttcaaaaatcaggac
ctgcaaggcagtctttctttcttctattccgatatcaacgacggttatgcctatgactac
aatgtcgatgcactaattgccaaacgcgttgccgccgtggtggtcgccgatgagaaagtt
tggggcttcgaggctactctggattatcgcctcaatgaggcaataaagatcggcacctcg
gtatctcaatctgaaggtaagcgcaccaacagtgagactggcgtagattattggatgaat
ggcacaaaaataaccccaatcaaggcgtcggcctatgccgattaccgattcaacgacatg
gcttctgtacgtatgcaggttaactatgtgggcgatagggataaaaacgatcgggaaagt
gaggctggctatagttactatgagtctccctatgatggctataccttagtggatcttatc
tcgacgttcgatacagactatgggcgctttaccttaggtatagataacttgcttaatgca
gactatcagcctctggtgtctcagatgaataaagaagttgtttgggaaaaatatcgcaat
cagttttcaggttacgggcgacgtttagccctcgaatatagcgtgaattactag
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