Shewanella violacea: SVI_4270
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Entry
SVI_4270 CDS
T01206
Name
(GenBank) small-conductance mechanosensitive channel
KO
K16053
miniconductance mechanosensitive channel
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_4270
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_4270
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
BAJ04241
UniProt:
D4ZF77
LinkDB
All DBs
Position
complement(4871525..4872766)
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AA seq
413 aa
AA seq
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MQISQWLSDWGINTSPSDGISTAVMVIVSIVLASLAYLFVKRGVVRAMNIVILRSKVSWD
DIFMGHKVLEKFAVLIPALILSILIPLALTEHQLLSSSIDRLLNVSILVLLIRAVYSGLD
AANEIADINLVSRRLPIKSFVQLFKLFLFFVAIIVSISILANQSPVYFLSGLGVMTGLVM
LVFRDTILGFVAGIQLAANRMVSPGDWIQMDKYGADGSVEEVSLTTVKVRNWDQTITMIP
AYALVSDAFKNWRGMSESGGRRIKRSIHIDIHSIRFLTEEELIRLGKINHLKDYLGRKND
EIAKFNLAISDVDTPVNSRKLTNIGTFRAYLKEFVANHENIHKDMTLLVRQLASTKEGVP
IEIYIFTNDTRWVYYEDIQGDIFDHVFAILPEFGLRAFQAPTGLDVRSLKGQS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatctctcagtggctgtctgactgggggataaacactagtccatcggatgggatt
tctaccgctgtgatggttatagtcagtatagtattagctagtctggcatatctgttcgtc
aagcggggcgtggtgcgggcaatgaatattgtcatacttaggtctaaagttagctgggac
gatatcttcatgggccataaggtgctggagaagtttgccgtcttgatcccagcactcata
ctcagcatattgatccccttagcactgaccgagcatcagctattgagtagctctatcgat
cgcttgctgaatgtgagtattctggtgctactgatccgcgccgtgtacagcggcctagat
gccgcaaatgaaattgccgatatcaatctcgttagccgccgtctgcccatcaaaagtttc
gtacagttatttaagcttttcctcttctttgtcgccatcatagtgtctatttcgatactg
gcgaaccagtctccggtctattttctgagtggcttaggtgtcatgactggtttggtcatg
ttggtgttcagggacacaattcttggcttcgtagccgggattcagttggcggctaaccgt
atggtcagtccgggtgactggattcagatggataagtatggcgccgatggttcagtggaa
gaggtctctttaactacggttaaggttcgaaactgggaccagaccataaccatgatccct
gcctatgcattagtgtcagatgccttcaagaattggcgcggcatgtcagagtctggtggt
cgcaggatcaagcgctcgatacacatagatattcactcgattcgcttcctcaccgaagag
gagctgattcgtttgggtaagattaaccacctgaaagactatttgggacgtaaaaatgat
gagatagctaagtttaatctcgctatctctgatgttgatacgccagtaaacagtcgtaag
ctcaccaatattggaacgtttagggcttatttaaaggagtttgtggctaatcacgaaaat
atacacaaggatatgaccttactggtgcgccagttggcatcgactaaggaaggggtgcca
atcgagatctatatcttcaccaacgatactcgctgggtatattatgaagatattcagggc
gatatcttcgaccatgtgttcgctatattgcctgaatttggcctaagagcctttcaggct
cccacaggattggatgttagaagtttgaaaggacaaagttaa
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