Shewanella violacea: SVI_4331
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Entry
SVI_4331 CDS
T01206
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
svo
Shewanella violacea
Brite
KEGG Orthology (KO) [BR:
svo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svo02000
]
SVI_4331
Transporters [BR:
svo02000
]
Other transporters
Pores ion channels [TC:
1
]
SVI_4331
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BAJ04302
UniProt:
D4ZFD8
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All DBs
Position
complement(4945602..4947818)
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AA seq
738 aa
AA seq
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MLPTFVISILRLAMSLLSRSFRVSPICVAVVSAFTLAPAVAEETKTEEVSSANIERISVM
GRSFNDYKVGSASGAMRGNISLMDTPQSVTVIPDFITDEQLATNLSEVLVNDSSVTGGSE
KWNRQVFSIRGFELSSGSGYLINGQQQWSHYVQPIETLQQVEILKGPSSMLYGQSGPGGL
INMVTKKPTYDTIFDLGFDTDEHGSTRFQLDAGGSLNEDQTIRYRTVLVKQDTQYWRTYS
AENGQDGANQERDRWLGYLNLEFDLSDDLLLSLKYDHTQDKTGIDRGGWLDSSGDLIGGS
DIIWDQPWAFTDNTITNMGADITYHISDDWQVKAGYNDQQFNRQRLDSSPNQCGKIDGQS
VCFDDPITDGYFVSPFDRYDDWQHKTGYVDFVGNFSTGELEHQFLLGANMLDYYYGQLKE
SGEKYQHVMPGQPQPKPDLDYNRDDTKYESDYKHYGFYIQDLMTINDQWQVLAGMRYDEQ
KKDGTGNNSYAVSPKFGVIYSPAANGSIYVNYSKSFTPQGMVNDLEDVNDKMNLDPEYGE
QYEIGTKWELFDGSLLLTGAVFDITVSNVTVTEDLDTSIDGGYQTITTQSGEQRHKGFEM
GAQGQVSDSWFLTGSMMYLNAEYQRPESNSLNGKTPVDAPEWSANVWTRYEMTDDLALNF
GAIYVGERFANTSNTVTKDAYVRFDMGTAYTMDVMGSDVSVRLNVKNLFDTDYLAGGGVT
DVTVGEGRHLSLALEAKF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgttgccaacttttgtgatatccattttgaggttggctatgtcattactttctcgttca
ttcagagtttcaccaatttgtgtggcagttgtctctgcttttacccttgcgccagctgtt
gctgaagagacaaaaactgaagaggtatcttcagcaaacatagagcgcatctcggtgatg
ggacgtagcttcaatgactacaaggttggtagcgcttctggtgccatgcgtggcaacatc
agccttatggatacaccacaatctgttacggtaattcctgattttattaccgacgaacaa
ctagcaaccaacttatctgaagtcttggtaaatgattccagtgtcactggtggctcggag
aagtggaatcgtcaggtattcagtattcgaggtttcgaactatcttctggttcaggctac
ttgatcaatggtcagcaacagtggtctcactatgtgcagcctatcgagacactgcagcag
gtcgagatacttaaaggaccatcgagtatgctctatggtcagtcaggtccaggtggcttg
attaacatggtcaccaagaaacctacctatgacactattttcgatctaggatttgatacc
gacgagcatggttctactcgttttcagctagatgccggtggcagcctgaatgaagatcaa
accattcgttatcgcactgtgctggttaagcaagatactcaatattggcgtacttattct
gccgagaatggtcaagacggcgctaaccaggagcgtgatcgttggttaggctatctgaat
cttgagttcgatttaagtgatgacctcttgttatcacttaaatacgatcatacccaagat
aagacaggtatagatcgtggtggctggttagacagcagtggagacctgataggtggtagc
gatatcatctgggatcagccttgggctttcaccgataacactatcactaatatgggcgcg
gatattacttatcacatcagtgatgattggcaggtaaaagcgggttataacgatcagcaa
tttaatcgtcagcgtctggactcttcacctaatcagtgtggaaaaatagatggccaatcg
gtttgcttcgacgatcctattactgatgggtattttgttagcccattcgatcgttatgat
gactggcaacataagactggttatgtcgactttgttggtaatttctcaacaggcgagtta
gagcatcagtttctactgggtgccaacatgctggattactactatggccaactcaaggag
tctggtgaaaagtaccaacatgtgatgcctggtcagccccaacctaagccagatcttgat
tacaaccgagatgatactaaatatgagagtgactataagcactatggtttttatattcag
gatctgatgacgattaacgatcaatggcaagtgctggccggtatgcgttatgacgagcag
aagaaggatgggacgggtaataacagttacgcggtttcgcctaagtttggtgttatctac
tcaccggcggcaaacggcagtatctatgtcaattattctaagagcttcacgcctcaaggt
atggtgaatgatttagaagatgttaatgacaaaatgaatctggatcctgaatacggtgaa
caatacgagatcggtactaagtgggagctgttcgatggcagcctgctattaaccggtgct
gttttcgatatcacagtttcaaatgtcacagttactgaagatcttgatacttcaatcgat
ggtggatatcaaactatcaccactcaaagtggtgagcaacgtcataaaggtttcgagatg
ggcgcccagggtcaggttagcgacagctggttcctgactggttccatgatgtatcttaat
gccgaatatcagagacccgaaagtaatagcttgaatggtaagacaccagtagatgcgcct
gagtggtcggctaacgtctggactcgttatgagatgacagatgatctggcgctcaacttc
ggtgccatctatgtgggtgagcgttttgcgaacaccagtaacacggtcaccaaagatgct
tatgttcgcttcgatatgggcacggcatacactatggatgttatgggtagcgatgttagc
gttcgcttgaacgttaagaacctattcgataccgattacttagcgggtggcggtgtgaca
gatgtgactgtgggtgaaggacgtcacttgagtctggcactggaagctaagttctaa
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