Stratiformator vulcanicus: Pan189_00020
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Entry
Pan189_00020 CDS
T09804
Symbol
dnaN_1
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
svp
Stratiformator vulcanicus
Pathway
svp03030
DNA replication
svp03430
Mismatch repair
svp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan189_00020 (dnaN_1)
03430 Mismatch repair
Pan189_00020 (dnaN_1)
03440 Homologous recombination
Pan189_00020 (dnaN_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svp03032
]
Pan189_00020 (dnaN_1)
03400 DNA repair and recombination proteins [BR:
svp03400
]
Pan189_00020 (dnaN_1)
Enzymes [BR:
svp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan189_00020 (dnaN_1)
DNA replication proteins [BR:
svp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pan189_00020 (dnaN_1)
DNA repair and recombination proteins [BR:
svp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pan189_00020 (dnaN_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QDT35649
UniProt:
A0A517QVI3
LinkDB
All DBs
Position
1603..2715
Genome browser
AA seq
370 aa
AA seq
DB search
MKLQCHRPTLSMAFGTVGSVVPARTPKEILKNVRIIAENGTATLIGTDSEIGVRYEIPEV
HVEEPGETLVPAGRFSQILRELTEDDFHLSIEDGGVWIRCGHSEFRLSPEDVADFPPVPS
FEETAYLAMPGGVLKEAIRRTVIATDTESTRYALGGVLLEAATDRVTFAATDSRRLSVVE
APCRQEGTVESNNAGPVVPSKAMQLIERSITDEDAEVALALHENDAVMRVGQCTISSRLV
QGRFPKYRAVIPDETPITIEMVAGPLYSAVRQAQIVTNDESRGVDFKFADGTLTLQSIAA
DVGQSKIELPIPYDGEALTITFDPRFVADVLRILDNDTAFTLHLTDGDSQAVIRVGDSFT
YVIMPLSRDR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcaatgtcatcgaccgacgctgtcgatggccttcggaacggtggggtcggtg
gtaccggcacgcaccccgaaggagatattgaaaaacgtccgcattatcgcggaaaacggc
actgccacgctcatcgggaccgactcggagatcggcgttcggtacgagattcccgaggtt
cacgtcgaagaaccgggcgagacgctcgttccagcggggcgattcagtcagatcctgcgg
gaactgactgaggacgacttccacctgtcgattgaagatggcggcgtatggattcgctgc
ggccatagtgaattccgactttctccggaggatgtcgctgatttcccaccggtcccttca
ttcgaagaaaccgcctacctggcgatgcccggcggcgtgctgaaggaagcgattcgtcgc
accgtgatcgcgaccgacaccgaaagcacgcgctacgccctcggcggcgtgctgctcgag
gccgctaccgatcgcgtcaccttcgccgccaccgacagccggcgtctctcggtggtcgag
gctccctgtcggcaggaagggaccgtcgagtccaacaatgcggggccggtcgtaccaagc
aaggcgatgcagctcattgagcgaagcatcaccgatgaagacgcggaggtcgcgctcgct
ttgcacgaaaacgacgccgtgatgcgggtcggccaatgcacgatttccagtcgactggtc
caagggcggtttccgaaatatcgagccgtcattcctgatgaaacgccgatcacgatcgaa
atggtcgccggaccgctctactcggccgtccgtcaggcacaaatcgtgaccaacgacgag
agtcggggcgtcgacttcaaattcgccgacggcacgctgacattacaaagcatcgccgcc
gacgtcgggcagtcgaaaatcgaattgccgattccctatgacggcgaggcgttgaccatc
acgttcgatccgcggttcgtcgccgacgtgctgaggattttggacaacgataccgcgttt
acgcttcatctgaccgacggtgacagccaggcggtcattcgagtgggcgactcgttcacc
tatgtcatcatgccgctatcacgggatcgataa
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