Stratiformator vulcanicus: Pan189_01360
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Entry
Pan189_01360 CDS
T09804
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svp
Stratiformator vulcanicus
Pathway
svp00061
Fatty acid biosynthesis
svp00071
Fatty acid degradation
svp01100
Metabolic pathways
svp01212
Fatty acid metabolism
svp02024
Quorum sensing
svp04146
Peroxisome
Module
svp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pan189_01360 (lcfB)
00071 Fatty acid degradation
Pan189_01360 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pan189_01360 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pan189_01360 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svp01004
]
Pan189_01360 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svp04147
]
Pan189_01360 (lcfB)
Enzymes [BR:
svp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pan189_01360 (lcfB)
Lipid biosynthesis proteins [BR:
svp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pan189_01360 (lcfB)
Exosome [BR:
svp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pan189_01360 (lcfB)
Exosomal proteins of breast cancer cells
Pan189_01360 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QDT35783
UniProt:
A0A517QW30
LinkDB
All DBs
Position
complement(175162..176991)
Genome browser
AA seq
609 aa
AA seq
DB search
MVSVGNGRSPGRRGALASSVNYLGSAVRRMWLPPDVTRPWLKSYPDEISARLDYPEAPLY
RLLEDAAALYPDRIACHYYEQAVSYEQMLAEARSLAKALVDGGVEPGDRVAVLLPNLPET
VASLFGIWMAGAVAVSVSPLMVAEEVNGILRATDAKVAITVDVLSPLICGDDHVPELVIM
TTLADRLSQLERFGYAWVRFQKIGFSKPCVRTRVLKYQDVVGEDADEFEPRVPACDDPAF
ILPTGGTTGHPKLVTLSHRNLSAQANQLSHWSFARPGEETILAVLPFFHSYGLSTSLLMG
TKLGATLVTHHRVKPTVVAELIEKHQPTILLAVPALLNALNTKVLRSKKRDFQSIVRVIS
GGAPLPKQVAEEFNDHAGAIIVEGYGLSEASPVTHAGPLDGTAVPGTIGLPLPDTDARIV
DAETGKRNLPVGEVGELIVRGPQVMLGYWNDEAATQAVIKNGWLYTGDLAVCDDRGFFKI
VDRKKDLIITSGFNVYPADVEEALREYPGVRDAAVVGIPDDERGELVKAILSIEKGSTFD
RTDFDAFTHRKLSAHKRPRVVETTTDDLPRNFLGKVLRRELRTAADAGTAALSPAERSEL
PEALEEASK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgttggaaatggccggtcgcccggcagacggggtgctctcgcttcgtctgta
aattacctggggtcggcagtccgccggatgtggctccccccggacgttacgcgtccgtgg
ctgaagagctacccggacgagatttcggctcgactagattatcccgaagcgccgctctat
cggctgctcgaggacgcagccgctctctacccagatcgcattgcctgccattattacgag
caggccgtcagctatgagcaaatgctcgctgaggcacgcagcctcgccaaagcgctggtc
gacggcggcgtcgaacccggtgaccgcgttgccgttttgctcccgaatctcccggagacg
gtcgcatcgctgttcggaatctggatggccggtgcggtcgcggtttctgtcagtccatta
atggtcgccgaagaagttaatggaatcctccgggcaaccgacgcgaaagtcgctatcacc
gttgacgttctttcgccgttaatttgcggcgacgatcacgtgcccgagttggtcatcatg
accacattggccgaccggctgtcgcaactcgagcgattcggttacgcgtgggttcggttt
cagaaaatcggcttcagcaaaccgtgcgttcgcacgcgggtgctgaaatatcaggatgtc
gtcggcgaagacgccgatgaatttgagccgcgggtcccggcgtgcgatgaccccgcattt
atccttccgactggcgggacgacggggcaccccaagctcgtcacgctgtcccaccgcaat
ctgtccgcacaagcgaatcagctgtcgcactggtcgtttgcccgaccgggcgaagagacg
atcctcgccgttctgccgttctttcacagttacggcttgtcgacttcgttattaatggga
acgaaactcggcgcgactttggtgacgcatcaccgggttaagccgaccgtcgtcgcggaa
ttaatcgaaaagcatcaaccgacgattctgctggccgtgccggctctgctgaacgcgctc
aatacgaaagtgcttcgcagcaaaaaacgcgatttccagtcgatcgtccgagtgatcagc
ggaggcgccccgctaccgaagcaggtggccgaggaattcaacgaccacgccggggcaata
atcgtcgagggctacggcctgtcggaagccagcccggtcacgcacgcgggaccactcgac
ggcacggccgtacccggcacgatcggccttccgctgcccgacaccgatgcgagaattgtc
gatgccgaaaccggcaagcgcaacttgcccgtcggggaagtcggcgaattaatcgtccgc
ggccctcaggtaatgctgggctactggaatgacgaagcggcaacacaagccgtaattaag
aacggctggctttatactggcgacctagccgtttgcgacgaccggggattctttaagatc
gtcgaccgcaagaaagacttgattattacttcgggatttaacgtctacccggccgatgtt
gaagaagccttgcgtgagtatccgggcgttcgcgacgcagccgtcgtcggcatcccggac
gacgagcggggagaactcgtgaaagcgattctctcgatcgaaaagggatcgaccttcgac
cgaaccgatttcgatgccttcacgcatcggaaattgtccgctcacaaacggcctcgcgtc
gtggagacgaccaccgacgatctgccgcgtaactttctcggcaaggttctccgccgcgaa
ttaaggacggcagcagacgccgggacggcggccttgagtcccgctgagcgatcggaactg
cccgaagcactcgaggaggcctcaaaatga
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