Stratiformator vulcanicus: Pan189_02440
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Entry
Pan189_02440 CDS
T09804
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
svp
Stratiformator vulcanicus
Pathway
svp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan189_02440 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svp03400
]
Pan189_02440 (mutM)
Enzymes [BR:
svp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pan189_02440 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pan189_02440 (mutM)
DNA repair and recombination proteins [BR:
svp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pan189_02440 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Phage_portal
Motif
Other DBs
NCBI-ProteinID:
QDT35891
UniProt:
A0A517QW72
LinkDB
All DBs
Position
311157..311987
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AA seq
276 aa
AA seq
DB search
MPELPEVETMVRGIRPHVAGRVITRVERCRCRYRPIDVTPSMRQIARRATGRTIVEVARR
AKRILLKLDSGDCFAIEPRMTGLMLVDAAPDRSHLRIRWRLDDGNDLWFWDRRGLGTLRL
YTPDEYEAALGPDRLGPEPLDMSTADWKQRLTGRSREIKVALLDQKLVAGIGNLYAAEIL
HAARIDPRRRTEGLSGREIGRIAARAIEILNEAIRYEGSTLSDGTYRNAINGEGRYQNEH
RVYGRAGQPCGSCGKATIVRIVQAQRATFYCPKCQR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaagtcgaaacgatggtccgcggcatccgcccgcatgtcgccgga
cgcgtcatcacgcgtgtcgagcgatgccgctgccgctatcgaccgatcgacgtcaccccg
tcgatgcggcagattgcgcgaagagcgactggtcgaacgatcgtcgaagtcgcccggcgg
gcgaagcgcattctgctcaaactcgattccggcgattgctttgcgatcgaaccccgcatg
acgggactcatgttggtcgatgccgcgcccgatcgctcgcacctgcgcattcgctggcgg
ttggacgatgggaacgacttgtggttctgggatcgtcgcgggctcggcacgctccgcctt
tacacgcccgatgaatacgaggcggcgctcggcccggatcgcctcggtcctgagccgctg
gatatgtcgactgctgattggaagcagcgattgaccggccgctcgagggaaatcaaagtc
gccctgctcgaccagaaactcgtcgccgggatcgggaatctgtacgccgccgagattctg
cacgcggcccggatcgacccgcggcgccgcaccgaaggactctctggcagagaaatcggc
cgtattgccgcgcgggcgatcgaaattctcaacgaggcgatccgctacgagggctccaca
ctcagcgacgggacctaccggaacgcgatcaacggcgaaggccgctaccagaacgaacac
cgcgtgtacggccgcgcgggccaaccctgcggctcctgtggtaaagccacgatcgttcgc
atcgttcaggcacagcgggccacattctattgtccgaaatgccagcggtga
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