Stratiformator vulcanicus: Pan189_05200
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Entry
Pan189_05200 CDS
T09804
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
svp
Stratiformator vulcanicus
Pathway
svp00540
Lipopolysaccharide biosynthesis
svp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pan189_05200 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
svp01005
]
Pan189_05200 (rfaF)
Enzymes [BR:
svp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
Pan189_05200 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
svp01005
]
Core region
Pan189_05200 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
QDT36165
UniProt:
A0A517QWX5
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All DBs
Position
complement(680301..681350)
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AA seq
349 aa
AA seq
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MKIAVFLPNWIGDAVMATPALRAIRDGYPDAEIIAILRPYVLDAVDGTNLFDRVIRWNPK
GPYDDERATGVVRKLRAARCELGVLFPNSIRSAVIAWRGRIKRRVGFARDGRGFLLTDRL
QPKSRTTPNPVIDEYCRLADAVGCGTDSRQTEAAVAPLHQLELEEFWSAFHPAIRERGIV
TLNPGGAFGAAKHWPAESFAALARRISSDLDKTVLVVCGPAEKKEAEQIVELADRPDILS
LADQPLTLGLTKAAIRDSDALVTTDSGPRHFAKPFGVPTVTLFGPTHKAWSETYDERSIH
VQLDLDCGPCQQRVCPLVHHRCMKDLGPERVFQAVRKLLANTQETRRAA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgccgttttccttcccaattggatcggtgacgccgtgatggcgacgccggcg
ctgcgggcgattcgcgacggatatccggacgcggagattatcgccatcctgcggccctat
gtgctcgacgccgtcgacgggaccaatttgttcgaccgcgtcattcgctggaatcccaaa
ggcccgtacgacgatgagcgagcgaccggcgtcgtccgtaaattgcgggcggcacgctgt
gaattgggtgtgctattccccaactcgattcgctcagccgtgatcgcctggcgtggccgg
atcaaacgacgcgtcggcttcgctcgcgatggccggggctttctgctaaccgaccggctt
caaccgaagtcgcggacgacacccaaccctgtgattgacgaatactgccgactcgccgac
gccgtcggctgcggaaccgactcacgtcaaacggaagcggccgtcgccccgctgcatcaa
ttggaactcgaagaattctggtcagcgtttcatccggcaattcgcgagcggggcattgtc
accttaaatcccggcggcgcgttcggtgcggcgaagcactggccggctgagtcctttgcg
gcgctggctcgccggatatcttcggaccttgataagacggtcctcgtcgtttgcggtccg
gccgagaaaaaagaagctgagcagatcgtcgaactggccgaccggcccgacatcttaagt
ctcgccgatcaaccgctgaccctcgggctgacaaaagccgcgatccgcgacagcgacgca
ctcgtcacgaccgactccggtccccgacatttcgcgaaaccattcggagtaccgaccgtc
acgctgttcgggccgactcacaaggcttggagcgaaacatacgatgagcgatcaattcat
gtgcagcttgacctcgactgcggcccgtgccagcaacgcgtttgcccgctcgtgcatcac
cgctgcatgaaagacctcggccccgagcgcgtctttcaagccgtccgcaaactgctggcg
aacacgcaggaaactcggagggctgcatag
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