Stratiformator vulcanicus: Pan189_13180
Help
Entry
Pan189_13180 CDS
T09804
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svp03016
]
Pan189_13180 (rnd)
Enzymes [BR:
svp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Pan189_13180 (rnd)
Transfer RNA biogenesis [BR:
svp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Pan189_13180 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDT36954
UniProt:
A0A517QZC5
LinkDB
All DBs
Position
complement(1657706..1658899)
Genome browser
AA seq
397 aa
AA seq
DB search
MPSRLIVEQSAFDALCEEFRAAGIVAFDTEFVSEYTYRPELCLMQFATENGVYGVDPFEV
ADLSEWWAIMADESIGIIVHGGQAEIRFCIDLAGITPQNVIDVQIAEGFRGRSYPLGYDA
LVSRVLGTKPGGKQTRTDWRRRPLTKEQVDYALADASYLLDVWKKQQADLKKRGRLDWVL
TECEQLIRTVEKEACRNPWDRLSGLHRLSPREFAVARSVAQWREDEARNRDRPLRRILRD
DLVIDLARRHPTTTKQLEATRDFHRTEANRTPEDLISAISRGLDTPQKELVPPPAAQTPD
KSPDEHMLGQLLGIALTSLCAEVGIARQLVGTAADLRHLVRWHLYEERDPPKPDLSVGWR
AEVCGDLLTDLLDGKISLRVADPDSDHPLVFDRIDDD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcacgactgattgtcgaacagtccgccttcgacgcactttgtgaagaatttcgg
gcggccggtatcgtcgcgttcgataccgagttcgtctccgaatacacgtaccgccccgaa
ctgtgcctgatgcagttcgcgaccgagaacggcgtgtacggtgtcgatccgttcgaagtt
gccgacctcagcgaatggtgggcgatcatggcggacgaatcgatcgggatcatcgtgcat
ggaggtcaggcggagatccgcttttgcatcgacctcgccgggatcacgccgcagaatgtg
atcgacgtgcaaattgccgagggattccgcggacggagctatccgctcggctatgacgcg
ttggtctctcgcgtcttgggaacaaagccgggaggcaaacaaacccgcactgactggcgc
cgtcgacctctgacgaaggagcaggtcgactacgcattggccgatgcctcgtatcttctt
gacgtgtggaagaaacaacaggccgacttaaagaaacggggccggctcgactgggtgctg
accgagtgcgaacaactcatcaggacggtcgaaaaggaagcctgccggaatccctgggat
cggctctccggactccaccggctcagcccgcgagaattcgccgttgcgcgatcggtcgcg
cagtggcgtgaggatgaagcccgcaatcgcgatcgccccctgcgtcgcattttgcgggac
gatctggtgatcgatctcgcccgtcgtcatcccacgacgaccaaacaactggaagccacg
cgagacttccatcgcaccgaggccaatcgaacaccagaagacttaatcagcgcgatttca
cgcggcctcgacacgccgcagaaagaactcgttccccccccggccgcgcagacgcccgac
aaatctcccgacgagcacatgctgggacaattattgggaatcgcgctgacgagtttgtgt
gccgaagtcggaatcgcccggcaactcgtcggcaccgcggccgacttaaggcacctcgtc
cgctggcacctctacgaggaacgcgacccacccaagcctgatctctcggtggggtggcgg
gccgaagtctgcggcgacctgttgaccgatttactcgacggtaaaatctcacttcgcgtg
gccgaccccgatagcgatcaccccctggtattcgatcgtatcgacgacgattag
DBGET
integrated database retrieval system
