Stratiformator vulcanicus: Pan189_16680
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Entry
Pan189_16680 CDS
T09804
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svp03009
]
Pan189_16680 (rimO)
Enzymes [BR:
svp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Pan189_16680 (rimO)
Ribosome biogenesis [BR:
svp03009
]
Prokaryotic type
ribosomal protein modification factors
Pan189_16680 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QDT37295
UniProt:
A0A517R066
LinkDB
All DBs
Position
2071059..2072471
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AA seq
470 aa
AA seq
DB search
MLELPVIDRPREEASADEAGSKDSRGNYAFISLGCPKNLVDSEKMLGHLALDGYTLVSEP
QGSDFVIVNTCGFIDSSRAESKAVIQEMIDLKQAGRTKGVIVAGCLPERLGGANLRAEMP
EIDHIVGVFARDEIAKVADRLVGNVNEQREVFRPAPIRALDDRARLRITPSHYAYLKISE
GCNRTCTFCSIPMMRGKHATKPIEEVVAEARELAADGVKELMLVAQDTTYYGIDLYGEMK
LVELIEELEQVDGIEWIRLMYLYPVNFTDRLIEKIATSPKVIPYLDMPLQHVNSKVLRRM
SRRVNRERTEALVRKLRESIDNLVLRTTFIAGFPGETEAQFEELVDFVQDMRFERMGVFP
YSIEPGTPAVKLDGHLPEDVKAARVDRLMQVQQQIAFEFAESLVGYELDVLIDGNNGDGF
SIGRTFADAPEIDANVYVRGAEGREGEFVSVEITGRDDYDWVGEVVANDA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgttggaactgcccgtaatcgatcgacctcgtgaggaagcctcagccgatgaggcgggt
tcaaaggattcccgaggcaattacgccttcatcagcctcggctgtcccaagaatttggtc
gacagtgagaagatgctggggcatttggcgctcgacggttacaccctcgtctcggagccg
caaggctcagattttgtgatcgtcaatacctgcgggttcatcgacagcagccgggcggaa
tcgaaggcggtcattcaggagatgatcgacctcaagcaggccgggcgaacgaaaggcgtc
atcgtcgccggatgcctgcccgaacggttgggcggggcgaacctgcgggcagagatgccc
gagatcgatcacatcgtcggtgtcttcgcgcgggacgagatcgccaaggtcgccgatcgg
ctggttggcaacgtcaatgagcagcgcgaagtttttcgccccgcaccgattcgtgcgctc
gacgatcgagctcggctgcgaatcaccccgagtcactatgcctatctgaagatctccgaa
ggctgcaatcgcacctgcacgttctgctcgatcccgatgatgcggggcaagcacgcgacc
aagccgatcgaagaggtcgtcgccgaggcccgtgaactggccgccgacggagtcaaggag
ttgatgctcgtcgcgcaggacacgacgtactacggcatcgacctgtacggcgagatgaag
ctcgtcgaactgattgaagaactggagcaggtcgacggcatcgaatggattcggctgatg
tacctctacccggtcaatttcaccgatcggctcatcgagaagatcgccacttcgccgaag
gtcatcccgtatctcgacatgccgctgcagcacgtaaattcgaaagtgctccgccggatg
tcacgccgcgtcaatcgcgagcggaccgaggcgctggtgcggaagctccgcgagtcgatc
gacaaccttgtgctgcggacgaccttcatcgccggattccccggcgagaccgaagcgcag
ttcgaggaactggtcgacttcgtgcaagacatgcgattcgaacggatgggcgtgtttccc
tattcgatcgaaccgggcactccggcggtgaagctcgacggccatcttccggaggacgtg
aaggcggcccgcgtcgatcgcctgatgcaggtccaacagcagatcgcgttcgagttcgcc
gaatcgctcgtcggctatgagctcgacgtgctgatcgatggaaataacggcgacggtttc
tcgatcggccggacgtttgccgatgcaccggagatcgacgcgaacgtctacgtccgcgga
gccgaggggcgcgaaggcgagttcgtctcggtcgagatcaccggccgcgatgattacgac
tgggtcggcgaagtcgtcgcgaacgatgcgtga
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