Stratiformator vulcanicus: Pan189_17020
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Entry
Pan189_17020 CDS
T09804
Symbol
appA
Name
(GenBank) Oligopeptide-binding protein AppA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
svp
Stratiformator vulcanicus
Pathway
svp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pan189_17020 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svp02000
]
Pan189_17020 (appA)
Transporters [BR:
svp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pan189_17020 (appA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
QDT37329
UniProt:
A0A517R0B2
LinkDB
All DBs
Position
complement(2114370..2116778)
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AA seq
802 aa
AA seq
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MSRNWVSASLFSSFALVTAILVSGCETAKSPGGDSGSKTASGGADPTSSSGSGLKPSAEF
DEGDLTSYPLMTEVDGIPVPRVDTAGPDVNVGGPVEVDKYNPAAKGNPTKPVVGGSINVR
FSNEPKTLNPIVETSAVQQVIHTYIHDGLADQDPETFEYKPAIAKSWTIEDSIRLAPDYP
GYELTLVIDDEPAENDSEVSVKLDDDQQIIAPAVKVTKADGSPAGRSWVGLYPTDGGLTL
HVWTDENGSLDLSAVPEGDYKARTGFELYGKVSETDEGYTLATETAGHPLALLLNEKGES
ELTLSKDDVQEVHRGSIFTFYLRDDVTWSDGTPYTSADVEFAYATINSRYVDAESLRTYY
ADVVLCDAIDETTVRMQYREQYFLAFEFAAAIALYGGPLHFFEDLYKEMGKELTLEPLTE
EQEAQSNKVSVTGKAFGKFFNTDDRYNLAPMGVGPYVVGDWDRGVSLELDRRDDYWRDNR
AGYLDQIRVKFIVDGSTAMQALRGGQVDFINRLDLSPEKFFEELKGPPEWIKKNYVKARW
YYPNYSYAGWNMLRPMFQDRRTRLALSMLFDSDEYLQKVKYGAGILISGNQYVLGPGYDH
DVQPVGYDLDAARDLLADAGWLDTDGDSWLDKGGDKFSFELLMPQGSSAGRSFAELFQKR
LKDVGIEVNVLELEWASFIERITAKDFDVCRLGWAMNLEGDPYQIWHSSGAGPDKRGSNH
VSYADPLVDEMIAKIRVTLDEQERHAIMHAMHRKLDHDQPYMFMFTTQDLGVYHQKYRGV
KFYALRPGYDLREWYIPESLQN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggaattgggtctcggcgtctctgttctcatccttcgcactcgtaacggcgatt
ttggtctccggttgcgaaaccgccaagtctccgggcggtgacagtggatcgaaaacggcc
tccggaggcgccgacccgacctcgtccagcgggtccggtctaaagccttcggctgagttc
gatgaaggtgacctgacctcctatccgctcatgacagaggtggacggcatccccgtcccg
cgagtcgacacggcaggccccgacgtcaatgtcggaggaccggtcgaggtcgacaaatat
aatcccgccgcgaaaggcaatccgaccaaaccggtcgtgggcggatcgatcaacgtgcgt
ttctcgaatgagccaaaaacgctcaatccgatcgttgaaaccagcgccgttcagcaagtc
attcacacctatatccatgacgggctcgccgaccaggatccggaaaccttcgaatacaag
cccgcgattgccaagagttggactatcgaagattcgatccgactcgctcccgattacccc
ggctacgaactgacgttggtgatcgatgatgagccggctgaaaatgactccgaggtttcg
gtcaaactggatgatgaccagcagatcatcgccccggcagtgaaagtcacaaaggccgac
ggctcgcccgccggccggtcatgggtcgggctctatccgacggatgggggtctgacactg
cacgtgtggaccgacgagaacggctcgctcgatctctcagccgtccccgaaggagattac
aaagcgcggaccggcttcgagctctacggtaaggtgtcggaaaccgacgagggatatacc
ctcgccaccgaaacggcgggtcaccctcttgcattgttattgaacgagaagggcgagagc
gaactcaccctttctaaagacgacgtgcaggaggtgcaccgtggatcgatctttacgttt
tatcttcgcgacgatgtgacttggagtgacggcacgccctatacctcagccgacgtcgag
ttcgcgtatgccacgattaacagccgctacgtcgatgcggaatcactgcgaacttattac
gccgatgtcgtgctgtgcgatgcgatcgatgagacgacagtccggatgcaatatcgcgag
caatactttctcgctttcgaatttgcggcggcgatcgcgttatacggcgggccgctgcat
ttctttgaagacctttacaaagagatgggcaaagaactgacactcgaacctttgaccgag
gagcaagaagctcagtcgaacaaggtcagcgtgacgggcaaagcgttcggcaagttcttt
aatacagacgaccgctacaatctcgcaccgatgggcgtcgggccgtatgtcgttggcgat
tgggaccgcggtgtctcgctcgaattagatcgacgagatgactattggcgggacaaccgc
gccggatatcttgatcagattcgcgttaaatttattgtcgacggatcaaccgccatgcag
gcgctgcgaggcggccaggtcgactttattaaccgactcgacctttcgcccgagaagttc
tttgaagaactgaaagggccgccggagtggattaagaagaattacgtgaaagcccggtgg
tattacccgaattacagctacgccggttggaatatgctccggccgatgtttcaggatcgc
cggacgcgactcgccttatcaatgctgtttgactcggacgagtacctacaaaaggtgaag
tacggagcgggtattctcatttccgggaatcaatacgtcttggggccgggctacgaccac
gacgtgcagccggtcggttacgatctcgatgcagcacgtgacctgttggccgatgcgggc
tggctcgatacggacggcgatagctggctcgacaaaggcggggacaaattctccttcgaa
cttttaatgccgcagggcagcagcgccggacgttcgttcgccgagctatttcaaaagcgc
ctcaaagatgtggggatcgaggtcaatgtgctcgaactcgagtgggcgtcgtttattgaa
cgaatcaccgcgaaagacttcgatgtctgccggctcggctgggcaatgaatctggaaggc
gatccctatcaaatctggcacagcagcggagcagggccggacaagcgcggcagcaatcac
gtctcctatgccgacccgcttgttgatgaaatgatcgccaagattcgcgtcacgctcgat
gagcaggagcggcacgccattatgcatgccatgcaccgcaaacttgatcacgatcagccc
tatatgtttatgttcacaacgcaagacctcggcgtctatcaccagaagtatcgcggcgtg
aagttctacgcactccgtccgggttatgatctgcgcgagtggtatatccccgaatcgctt
caaaactga
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