Stratiformator vulcanicus: Pan189_25190
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Entry
Pan189_25190 CDS
T09804
Name
(GenBank) Collagen triple helix repeat (20 copies)
Organism
svp
Stratiformator vulcanicus
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Paralog
GFIT
Motif
Pfam:
Collagen
DUF5035
SMBP
GEX3_C
7tm_7
Motif
Other DBs
NCBI-ProteinID:
QDT38129
UniProt:
A0A517R2M0
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Position
3137370..3139244
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AA seq
624 aa
AA seq
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MRMIESTTDRNFLRTPLRLAIVAVVACSMIPSVASAQDLTEALGNRSLPDRAEALRVRFS
RLEDTFFKLARYLEKTEPEKAELLLRALRQSKEERIEDRMKAIVTMLGGGGAEVRQYGDA
LDEQEAVLARLQELLKLLRSEDILADNRKEQERIRDLIKNTRILIDREKVHQAETQRGGD
LSDVTEDQEKTAEMTGKLVEKIDRQDAEKSGAAGEKGESGEGEKGESGEKGESGEGEKGE
SGEKGESGEKGESGEGESGEKGESGEGESGEKGESGEGESGEKGESGEGEKGESGEKSES
GEGEPGESGESGDSGESGESGESGESGQSGQSGQSGQSGQSGQSGESGEQSDEKTPGRDE
IEKAKQEMERAIEELKKKNAENATEAQTEAINELIKAKEKLEEILRQLREEERELLLRAL
EARFQKMLRMQVEVRAETVRLGAIASDEWGAREFGQSRDASNKELEIALEIDKALALLRE
DGSSVAFPEAVAQLKEDVLLIVGFLAENNAGELTVAVEDDVILALKEILEALQREMEKLR
EQQQQQQQGQQGQQQDKALVDKLAELKMLRTLQKRVQRRTRTLSRLFEGEQAAKPDVVEQ
LRQLSGRQQRIQEATYDLATGRTE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgatcgaatcgacgacagaccgcaattttctgcggactccgctacgcctggca
attgtcgcggtcgtcgcttgctcgatgatcccgtcggtcgcgtccgcacaggacctgacg
gaagcactcggcaatcgcagcctgcccgatcgggccgaagcgctccgcgtccgcttcagt
cggctcgaagacacgttcttcaaactggctcgctatctcgaaaagaccgagccggaaaag
gcggaactgctgctgcgtgcgcttcggcagagcaaggaagaacgaatcgaagatcgcatg
aaagcgatcgtcacaatgctcggcggcggcggggccgaagtccggcaatacggcgatgcc
ctcgacgagcaggaagcggttctggcccgcctgcaggaattgctcaagctgcttcgaagc
gaagacatcctggccgacaaccgcaaggaacaagagcgcatccgcgatctgatcaagaat
acgcgaatcttgattgaccgggagaaagtccatcaagccgaaacgcaacgcggcggcgat
ctgtccgatgtgacggaagatcaggaaaagacggccgagatgaccggcaaactcgtcgag
aagatcgatcgccaggacgccgagaaatcgggcgccgccggtgagaaaggtgagtcgggg
gaaggggagaaaggcgagtccggggagaaaggcgagtcaggcgaaggcgagaagggcgag
tcaggagagaaaggggagtcaggcgagaaaggtgagtccggcgaaggcgagtcgggcgag
aagggtgagtccggagaaggcgagtcgggcgagaagggtgagtccggagaaggtgagtcg
ggcgagaagggtgagtccggagaaggtgagaaaggcgagtcaggagagaagagcgagtcg
ggtgaaggagagccgggcgagagtggtgaatcaggtgatagcggcgaatcaggcgagagt
ggtgagtccggagagagcgggcagtccggccagtcgggtcagagcggacagtcaggtcag
agtggccagtcaggcgagagcggtgaacagagtgacgagaaaacacccggtcgcgatgag
atcgaaaaagccaagcaggagatggagcgcgcgatcgaggagttgaagaagaaaaacgcc
gaaaacgcgaccgaagctcagaccgaagcgatcaatgaactgatcaaggccaaggaaaag
ctggaagagattctccggcaacttcgagaagaagagcgggaactgctgctccgcgctttg
gaagctcgcttccagaagatgctccggatgcaggtcgaagtccgcgccgaaaccgttcga
ctgggagccatcgcgagtgacgaatggggagcgcgcgagttcgggcagtcgcgagacgcg
tcgaacaaagagctcgaaattgccctcgaaattgacaaggcgttggcattgcttcgcgaa
gacggctcgtcggtggcgttcccggaagccgtggcccaattgaaggaagacgtcctgttg
atcgtgggcttcctcgcggaaaataatgccggagagctgacggtcgccgtcgaagatgac
gtgatcttggccctgaaagagattttggaggctctgcagcgcgagatggaaaaacttcgc
gaacaacagcagcagcaacagcaaggtcaacagggtcaacaacaggacaaggcgctggtc
gacaaactggcggaactaaaaatgctccgtacgttgcaaaagcgggtacaacggcggacc
cggacactctcgcgtctgtttgagggcgagcaggctgccaagcccgacgtcgttgaacag
ctccgccaactttccgggcgacaacagcgtattcaagaggcaacttacgatctcgcgacc
ggtcgcacagagtga
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