Stratiformator vulcanicus: Pan189_31650
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Entry
Pan189_31650 CDS
T09804
Symbol
rsmE
Name
(GenBank) Ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svp03009
]
Pan189_31650 (rsmE)
Enzymes [BR:
svp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
Pan189_31650 (rsmE)
Ribosome biogenesis [BR:
svp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Pan189_31650 (rsmE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Methyltrn_RNA_2
Motif
Other DBs
NCBI-ProteinID:
QDT38767
UniProt:
A0A517R4G4
LinkDB
All DBs
Position
complement(3863960..3864652)
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AA seq
230 aa
AA seq
DB search
MSERFFVEQLEVGEIRLDKGESQHFATVMRGTVGSTVQLFDGTGREAFGNVTDVSKKSVR
ILVESVQLTEQPEPRLTLAVAPPKGDRFRWLIEKATELGVARVIPLITERSVVDPRDSKL
ERLRQNVIAACKQSGRSRLMVIDRPIALPKLLKQASEEQIVLLDPHGSTDPVGIKETSTT
TAFIGPEGGFSDEELKLFEELEATKIRLGSHILRTETAAIAAAARLAFRE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaacgattctttgtggagcagttggaagtcggggaaatccggctcgacaaaggc
gagtcgcagcatttcgccaccgtgatgcgcggcaccgtcggtagcactgttcaactcttc
gatggcaccggccgcgaggcgttcggaaatgtcaccgacgtttcgaagaagtcggtcaga
attttggttgagtcggttcagttgaccgagcaacccgaaccgcgtctgacgctggcggtc
gccccgccgaaaggagatcggttccgttggctcatcgaaaaggcgacggaactcggggtg
gcccgcgtgatcccgctgattaccgaacgcagtgtcgtcgatccgcgcgacagcaaactg
gaacgactccggcagaacgtcatcgccgcctgcaagcagtcgggccgctcgcgactgatg
gtcatcgatcgaccgatcgccttgccgaagttgctgaagcaggcatccgaagagcaaatc
gtgttgctcgatccgcacggatcgactgatcctgtcggaatcaaagaaacttcaacgacg
accgcgtttatcggcccagagggcgggttcagcgacgaggaactgaagttgttcgaagag
cttgaggccacgaaaatccgcttgggatcgcatattcttcggaccgaaacggcggcgatc
gccgctgcagcgcgattggcatttcgagagtga
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