Stratiformator vulcanicus: Pan189_32770
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Entry
Pan189_32770 CDS
T09804
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svp03021
]
Pan189_32770
03009 Ribosome biogenesis [BR:
svp03009
]
Pan189_32770
Transcription machinery [BR:
svp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Pan189_32770
Ribosome biogenesis [BR:
svp03009
]
Prokaryotic type
rRNA transcription factors
Pan189_32770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_NusA_1st
KH_NusA_2nd
NusA_N
KH_NusA_C
HHH_5
KH_2
S1
Cdd1
Motif
Other DBs
NCBI-ProteinID:
QDT38878
UniProt:
A0A517R4R8
LinkDB
All DBs
Position
3992477..3994123
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AA seq
548 aa
AA seq
DB search
MKGTEILRIVDAIHRDKSIDQNIVFEGIEQAIASAARKHFGEEEEVEVAIDRVSGDAAVS
VAGKALDADEIGDLLGRIAAQTAKQVMIQKIREAERDSLHDEYTQLRGQIVNGQIARIEG
GGTAAVNLGKVEAILPRGEQIPGEQHHVGERVRSVVMEVRKAGSRVKIILSRNHPELVRR
LFEIEIPEVAEHVIEVRSLSREAGYRSKVAVSCYDPKIDCVGACVGVRGARIRNIVEELA
GERIDIVRWNDSLQVLVPNALQPAEVEDVILCPQLGKVIVLVQDDQLSLAIGKKGQNVRL
ASKLVGWDIQVLTQERLDVQIDKSLAGFTQVPHITDELAENLVAQGFFTFDELSIIEPDQ
LAEMGGLTEEQVDVIVAYADVESLKAEKQEKEDRDRRRKAAALGEVAESNKASAPPETTE
AAKPEGDDSESDKTSSPEGESAAESTPESESEAATTDDAPAAEEVAETPVADAKTDSEME
VKIEETESAASAVEVEVAEETKPVEAAAEATETETSEESSESDATSEADSAEPEIVEETP
AGSSEGRS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcacggaaatcctgcggatcgtcgatgcgatccatcgcgacaagagcatcgac
cagaacatcgtcttcgaggggatcgaacaggcgatcgcttcggctgcgcgcaagcacttc
ggcgaagaagaagaggttgaagtcgcaatcgatcgggttagcggcgatgccgccgtcagt
gttgccggcaaagcactcgatgccgacgaaatcggtgacctgcttggccggatcgccgcg
cagaccgccaagcaggtgatgatccaaaagatccgggaagccgaacgggatagcctgcac
gacgaatacacacagcttcgcggtcagattgtgaacggtcagatcgcccggatcgaaggc
ggcggaacggccgccgtcaatctcggcaaggtcgaagcgattctgccacgcggtgagcag
attcccggcgagcagcatcacgtcggcgaacgcgttcgctccgtcgttatggaagtccgc
aaagcgggaagccgcgtcaaaatcattctttcgcgcaatcaccccgagttagtgcggcga
ctcttcgagatcgaaatccccgaagtcgccgagcacgtcatcgaagttcgctcgctctcc
cgcgaggccggttatcgctcaaaggtcgcggtctcctgctacgacccgaagatcgattgc
gtcggtgcctgtgtcggcgtccgcggagctcggattcgcaatatcgtcgaagaattggcc
ggagagcggatcgacatcgtccgctggaacgactctttgcaggtgttggtgcccaacgcg
cttcaaccggccgaagttgaagacgtcatcctctgccctcaactgggcaaggtgatcgtg
ctcgtgcaagacgatcagttgtcgctggcgatcggcaagaagggccagaacgttcgcctc
gcctcgaagctggtcggttgggacattcaggttctcactcaggagcggctcgacgttcaa
atcgacaagtcgctcgccgggttcacacaggtgccgcacatcactgatgaactggcggaa
aatctcgtcgcgcaaggcttcttcaccttcgacgaactatcgatcatcgaacccgatcag
ctggccgagatgggcggactgaccgaagaacaggtcgacgtaattgtcgcctatgccgat
gtcgaatcgttgaaagccgaaaagcaggagaaagaggatcgcgaccgccgtcgcaaagcg
gcggcactgggcgaagtcgcggaatccaacaaggcatcggctcccccggagaccacggaa
gccgcaaagccggaaggagacgactccgaaagcgacaagacatcgtcgccggaaggagag
tctgctgccgagagcacgcctgagtccgagtcggaagccgcgacgaccgacgatgcaccc
gctgcggaagaagtcgccgaaacacccgtcgccgacgcgaagacggattcggagatggaa
gtgaagatcgaagagacagaatcagccgcttcggctgttgaagtcgaggtggctgaggag
accaaaccggtcgaggcggccgcagaagcgacggagactgagacttcggaggagtcgagc
gagtccgacgcgacatcggaagccgactcagcggagccggagatcgtcgaggagacaccc
gccggttcatcggagggtcgaagttaa
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