Stratiformator vulcanicus: Pan189_36410
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Entry
Pan189_36410 CDS
T09804
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svp03400
]
Pan189_36410
Enzymes [BR:
svp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pan189_36410
DNA repair and recombination proteins [BR:
svp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pan189_36410
Prokaryotic type
Pan189_36410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QDT39237
UniProt:
A0A517R5R7
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All DBs
Position
4409848..4411248
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AA seq
466 aa
AA seq
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MSVVPTSQIETERVRKLNDHSARAGKYVLYWMQQSQRARFNPALEFAVQKANEHEKRLLV
GFGLTDDYPEANARHYHFMLEGLKETQESLHKRGIKFVLQFGSPDEVAIHLAKEASAVVC
DRGYLRHQKIWREKLVDAIDCEITEVEGDAAIPVETVSDKAEYAARTIRPKTNRHRDEFL
VTLSTTSLQKNSLNIRVSGESLDDVPGLVAGMKIDHSVKPVPQFFPGGTGEAKRRLRNFI
KELFAKYDEHRSKPEYEHTSCMSPYLHFGQLSPVELAIAIRDSGADPEQIDSYLEELLVR
RGLSQNFVYFTDDYDQFSCLPDWAKKTLGEHKSDRREHDYGLDELEAADTHDEYWNAAMR
EMKYTGYMHNYMRMYWGKKILEWSPDPEDAFQNCLILNNKYFLDGRDTNSYGNVAWVFGM
HDRAWQERAIYGKIRCMMASGLERKCDIDAYVERVDALVKQAENGS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtcgtgccgacaagtcagatcgaaaccgaacgcgttcgaaaactcaacgaccat
tctgctcgcgcaggcaaatatgtcctttattggatgcaacagtcgcagcgagcgcgattc
aatccggctctcgaattcgcggttcaaaaagccaacgaacacgaaaagcgactgctcgtg
gggttcggtctgacggacgattatcccgaagcgaatgcgcggcactaccactttatgctc
gaaggactgaaagagactcaggaaagtctccacaaacgaggcatcaaattcgttctgcag
ttcggctcacccgacgaggtcgcgattcacctcgccaaagaggcctccgccgtcgtgtgt
gatcgcggctatcttcgccatcagaaaatatggcgcgaaaaattggtcgacgcgatcgac
tgcgagatcacagaggtcgaaggggacgccgcgattccggtcgagacggtctccgacaag
gcggaatatgccgcgaggacgatccggcccaaaacaaatcggcatcgcgacgagttcctc
gtcacgttgtcgacgacctcgttgcaaaagaattcgctcaatatccgcgtgagcggcgag
tcattagacgatgtgcccgggctggtcgccggaatgaaaattgatcactccgtgaaaccg
gtaccgcaattctttcccggcgggaccggagaggcaaaacgacgactccgcaacttcatt
aaggagctgtttgcgaagtatgacgagcaccggagtaaaccggagtacgagcacacatcc
tgcatgagcccgtatctacacttcgggcagctttcgcccgtcgagttagccatcgccatt
cgagacagcggggccgatcccgagcagatcgacagttatcttgaagagctcttggtccgc
cgcggactatctcagaactttgtctacttcaccgacgattacgaccagttcagctgcctt
cccgactgggcgaaaaagacactgggcgaacacaaatcggaccggcgcgagcacgattac
ggtctcgatgaattagaagccgccgacacacacgatgaatattggaacgcggcgatgcga
gagatgaaatataccgggtatatgcacaactacatgcgaatgtactggggcaagaagata
ttagagtggtcgcccgacccagaggacgcattccagaattgtttaattttaaacaacaag
tacttcctcgacggaagagacaccaattcctacggcaatgtcgcctgggtctttggcatg
cacgaccgggcatggcaggagagagcaatctacggaaagattcggtgcatgatggcatcg
gggttggagcggaaatgcgatatcgacgcctacgtcgaacgggtcgacgcactggttaaa
caggccgaaaacggaagctga
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