Stratiformator vulcanicus: Pan189_38010
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Entry
Pan189_38010 CDS
T09804
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svp03016
]
Pan189_38010
Enzymes [BR:
svp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Pan189_38010
Transfer RNA biogenesis [BR:
svp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Pan189_38010
Prokaryotic type
Pan189_38010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
QDT39394
UniProt:
A0A517R676
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All DBs
Position
4609397..4610239
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AA seq
280 aa
AA seq
DB search
MIENLPLRQIKHGEFTIEGYSRAAVQSYWRIPELKLAFELGGSPWDFMGTPTAFVSHGHL
DHLAAIPVYVARRRMMKMEPPVIYLPEEIVDNVWRMLRAWQKLDRGRMLCELVGVKGGEE
IELSREHVVTVFPTAHTVPSVGYIIWDRRRKLKPEYQSLSQDEIRELATAGTDVSGEVRV
PQICFTGDTAPKGLDADPAAYEAKILITEMTFFRPEHRKEKIHKFGHMHLDDILERAERF
QNELIVLAHFSTRYQDHQVRRAVDRRMPESLRSRVELWTE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaaatctcccgcttcgccagattaagcatggcgagttcacgatcgaaggctac
tcccgcgctgcggtgcagagctattggcgtattcccgaactgaagctcgccttcgaactc
ggcggcagcccgtgggacttcatgggcacgcccacggcgttcgtctctcacgggcacctc
gaccacctggcggcaatccccgtctacgtcgcccggcggcggatgatgaaaatggagccg
ccggtcatctatctgccggaagagatcgtcgacaacgtctggcgaatgctcagggcgtgg
cagaagctcgaccgcggacgcatgttgtgcgaactcgtcggggtcaaaggcggggaggag
atcgaactcagtcgcgagcacgtcgtgacggtctttccgaccgcgcacaccgtccccagc
gtcggctacatcatctgggatcgccgacggaagctgaagccggagtatcagtcactctcg
caagacgaaattcgtgagctggcgacagccgggaccgacgttagtggtgaagtccgggtc
cctcaaatctgttttaccggcgacaccgcgccgaagggactcgatgccgacccggccgct
tacgaagcgaagatactcatcacggagatgacttttttccgaccggaacatcgcaaggaa
aaaatccacaaattcggccacatgcatttggacgacattctggagcgcgccgagcgcttt
caaaatgagctcattgtgctcgcgcacttcagcacccgctatcaggaccaccaggtgcgt
cgcgctgtcgatcgacgaatgcccgagtcgcttcgctcccgcgtcgaactctggaccgag
taa
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