Stratiformator vulcanicus: Pan189_40170
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Entry
Pan189_40170 CDS
T09804
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
svp
Stratiformator vulcanicus
Pathway
svp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pan189_40170 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svp02000
]
Pan189_40170 (msbA)
Enzymes [BR:
svp01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Pan189_40170 (msbA)
Transporters [BR:
svp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pan189_40170 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
AAA_15
AAA_25
DUF4928
GSH_synth_ATP
AAA_30
AAA_23
Zeta_toxin
AAA_24
PSD13_N
YqhI
DUF3584
Dynamin_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QDT39608
UniProt:
A0A517R6U4
LinkDB
All DBs
Position
4862213..4864465
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AA seq
750 aa
AA seq
DB search
MAKREVPIAGTFSRVWPYIWRYRKAAILSLFVAVLVSFFWGLNLSLTFPVVKVLLEGDSP
DQYVHGKIERAELDRTQATARLTLIESQLSEFGTDLTAEQNDERVDLLLDQSKQQRRLSA
AGQTLLIMNWVDAYVLPLLPADQFDLLAVIFLTLFITTVIKGICVFIQDVLVGTVIERTI
MDLRKEMFRKTLALDYQTVAMRGTPELMSRFTNDMGQLSYGLQIIGGRVVREPLKAMACI
VGAMCVSWRLTLLSMIVAPLAGFILYSIGKRLKKASHRVMESMSQIYKTLEETFDSMKVV
IAFNGAPSHRRRFHHQNKSYYRKALKIVSIEAMTSPTTEALGFLAAFGALLPGAYLVLRG
VDSIWGIKLASNRLDIAELSLLYGFLAGTLDPLRKLSSIYNKLKRSTAAADRIFGLMDSD
SLLHEPTEPKRLPRLARQIEFKEVEFHYAVDSETVPPSHRRPVLDGIDLTVKAGEVVAVV
GGNGSGKSTLLNLLPRFFDPTHGNVSIDGIDLRDVRLRELRDQIAMVTQETHLFDATIEE
NIRYGRPGATEAEVHEAARRAHVTDFLSNLAEGIKTPVGEKGRKLSGGQRQRIALARAIL
RDPAILILDEATSAVDANSEKLIQEAIGDFATGRTVFLITHSVSKTLLQFVTKVAVMQHG
RLIGYGSHHQLLETCPAYRKSMKTQGEERAGNFEDAEATEAPHAEASAFDPEEIDSPIEE
TPVSSEPPHSPPMPKILSFDVARRVTGTDS
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgagaagtgccgattgcgggaactttctcccgcgtttggccttacatctgg
cgataccgcaaagcggcgattctttcgctgtttgtcgccgtactcgtatcgttcttctgg
gggctcaatctctcactgaccttcccggtcgtgaaagtcctgctcgaaggcgacagcccc
gatcagtatgtccacggaaagatcgagcgagccgaactcgatcgcacacaggcgacggca
agactcacgctgatcgaatcgcaattatcggagttcggtaccgatcttactgcggagcag
aacgacgaacgtgtcgacctgctgctcgaccagtcgaagcagcagcggagactctcggcg
gccggtcaaacgctcctgatcatgaattgggtcgacgcatacgtgctgccgctgctaccg
gcagaccagtttgacctgctggcggtcatctttctgacactatttatcacaacggtcatc
aagggcatttgtgtcttcatccaggacgtgctcgtcggcaccgtgatcgaacgcacgatc
atggatctgcggaaggagatgttccgcaagacgcttgcgctcgactatcagacggtcgcg
atgcgcggtacgccggagctgatgtcccgcttcaccaacgacatggggcagctctcatac
ggcctgcaaatcatcggcgggcgggtcgtccgcgaaccgctcaaagcgatggcctgcatc
gtcggggcgatgtgcgtcagttggcgattaacgctgctgtccatgatcgtcgctccgctc
gccggattcatcctctacagcatcggcaaacgcctcaagaaggcgagccaccgcgtcatg
gaaagcatgtcgcaaatctacaagacgctcgaagaaaccttcgactcgatgaaggtcgtg
atcgccttcaacggtgccccatcgcatcggcggcggtttcaccatcaaaacaaatcgtat
tatcgcaaggctctgaagattgtttcgatcgaggcgatgaccagccccacgaccgaagca
ctcggttttctagccgccttcggggcactcctgccgggagcttacctggtgctccgcggc
gtcgattccatctggggaattaagctcgcctcgaaccgactcgatattgccgagctatcg
ctgctgtatggttttctggccggcacactcgatccacttcgaaaactgtcgtcgatctac
aacaaactaaaacgctcgaccgcagccgccgatcgcatcttcggcctgatggatagcgat
tcgctgctgcatgagccgacggaaccgaagcggcttccgcgactcgctcgacaaatcgaa
tttaaagaagtcgagtttcactacgccgtcgatagcgaaactgtcccgccaagccatcgt
cgacctgtgcttgacggtattgatctgacggtgaaagccggcgaagtcgtcgcggtcgtt
ggcggcaacggttccgggaagtcgacgctgttgaatctcttaccgcgattcttcgatcca
acgcacggaaatgtttcgatcgacggcatcgacctgcgtgatgtccggctgcgggagctc
cgtgatcagatcgcgatggtcacccaggagacgcacctattcgacgccacgattgaggaa
aacattcgctacggtcgccccggcgcaactgaggccgaagttcatgaagcagcgcgccgc
gcccacgtgaccgattttctgtcgaacttagccgaaggcattaagaccccggttggcgaa
aaaggccgcaaactctccggcggacagcgtcagcggatcgcactggctcgcgccattcta
cgtgatccggcaatcctgattcttgatgaagccaccagcgcggttgatgcgaacagcgaa
aaattaattcaggaagcgatcggcgatttcgccacgggccgaacggtgtttctcattacg
cactcagtgtcgaagacacttctgcaattcgttacgaaggtcgccgtcatgcaacacgga
cgtttaatcggctacggttcacaccatcaactgctcgagacctgccccgcctatcgcaag
tcgatgaagacgcaaggcgaggaacgcgccggaaacttcgaagacgcggaagcaacggaa
gccccgcacgctgaggcctcggccttcgaccctgaagaaattgacagtccgatcgaagaa
acgccggtcagcagtgagccgccacactcgcctccgatgccgaaaatcctgagcttcgat
gtcgcgcgtcgcgtaaccggcaccgactcgtaa
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