Stratiformator vulcanicus: Pan189_43470
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Entry
Pan189_43470 CDS
T09804
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
svp
Stratiformator vulcanicus
Brite
KEGG Orthology (KO) [BR:
svp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svp03019
]
Pan189_43470 (yhaM_2)
Messenger RNA biogenesis [BR:
svp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan189_43470 (yhaM_2)
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Ppx-GppA_III
Motif
Other DBs
NCBI-ProteinID:
QDT39935
UniProt:
A0A517R7U3
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All DBs
Position
complement(5217614..5218645)
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AA seq
343 aa
AA seq
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MPLFPDTPRTRLADLEDGEEAEFFALLVQKDKSTTRDGKPYYRVQFRDPGRTVTAMVWND
SPQFADCHGSWQPGHFFRMTAKFGQTKYGPQIDLREIRAVTDDDRTDGFDPADFSESTKF
DRPGLFAELNSLAQEHIDDPQVLRLVTEILDDNEAMLLTHPAAARNHHAFVGGFLEHVVS
VTRTAAYLADKYVDLYPEMSPPLSKGLVVAGAILHDIGKLIELRATPAGAEYTAEGRLVG
HILLGRDIVRDKANQIEDFDAETLLRLEHIVISHQNLPEWGSPISPHTPEALLVHYADDI
DAKFQMMASALSPTDAQDEFTGRDNGLRRMIFRGLHRESESPE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgttccccgacactccccgcacccgccttgccgaccttgaagacggtgaggag
gccgagttctttgccctcttggtgcagaaagacaagagcacgactcgcgacggcaagccg
tactaccgcgtccagttccgcgatcccgggcggaccgtgacggcgatggtgtggaatgac
tcgccgcagttcgccgattgccatggctcgtggcagccggggcacttctttcggatgacc
gccaagttcggccaaacaaagtacggcccgcagatcgacctccgcgagattcgcgcggtg
accgacgacgaccgtaccgacggcttcgaccccgccgacttcagcgaatcgacaaagttc
gaccgccccggcctcttcgccgagttgaattcgctcgcccaagagcatatcgacgacccg
caggtgctccgcctcgtcaccgagattcttgatgacaacgaagcaatgctgctgacccat
cccgcggccgcccgcaatcaccacgctttcgtcggcggctttctcgagcacgtcgtctcc
gtcacccgcaccgcggcctatctcgccgacaagtacgttgacctttacccggagatgtcg
ccgccgctgtcgaaaggccttgtcgtcgccggggcgatcttacacgacatcggcaagctg
atcgaactccgcgcgacccccgccggggccgagtacaccgccgaaggccggctcgtcggg
cacattctcctcggccgagacatcgtccgcgacaaggcgaaccagatcgaagacttcgat
gccgagacgctcctccggctcgagcacatcgtgatcagccaccagaacctccccgaatgg
ggcagccccatcagcccgcacacccccgaggccctgctcgtccactacgccgacgacatc
gacgccaagttccagatgatggcctccgcgttgtcgccgaccgatgcgcaggacgaattt
accgggcgggacaacgggctgcgtcgtatgatctttcgtggactccaccgcgaatccgaa
tcaccggagtga
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