Streptomyces vinaceusdrappus: N6Q81_12790
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Entry
N6Q81_12790 CDS
T11167
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
svq Streptomyces vinaceusdrappus
Pathway
svq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N6Q81_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svq03400
]
N6Q81_12790
Enzymes [BR:
svq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
N6Q81_12790
DNA repair and recombination proteins [BR:
svq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N6Q81_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
PhoH
NAT10_TcmA_helicase
TraI_hel_assoc_N
PIF1
AAA_16
NPHP3_N
nSTAND3
HTH_IclR
DEAD
AAA
UvrD-helicase
UvrD_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UXI78853
UniProt:
A0ABY6BSV3
LinkDB
All DBs
Position
complement(2778418..2780673)
Genome browser
AA seq
751 aa
AA seq
DB search
MTDQPPSAPGERRLATLEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQVG
ESLRMEGRWGSHPQYGKQFHVENYTTVLPATVQGIRRYLGSGLVKGIGPVFADRITQHFG
IDTLRIIEEEPKRLIEVPGLGPKRTKKIADAWEEQKAIKEVMLFLQTVEVSTSIAVRIYK
KYGDASISVVKNQPYRLAADVWGIGFLTADKIARSVGIPHDSPDRVKAGLQYALSQATDQ
GHCYLPEEKLIADAVKLLHVDTGLVIECLGELAAEPESPDDDPGVVREKVPDPEGGDPVT
AVYLVPFHRAELALAGQLRRLLRADVDRMPGFQDVAWDKALGWLKRRTGADLAPEQEAAV
KLALTEKVAVLTGGPGCGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEAST
VHRLLELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLFVGDVDQ
LPSVGAGEVLRDLLAPGSPVPAVRLTRVFRQAQQSGVVTNAHRINAGQHPLTDGLKDFFL
FVEDDTEEAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPG
RPDLAEKRFGGRVFRVGDKVTQIRNNYEKGENGVFNGTVGVVTSLDPVDQRLTVLTDEDE
EVPYEFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKKLVV
LVGSRKAIGQAVRTVSAGRRCTALDFRLATP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccagcccccctcggcccccggtgagcggcggctcgccaccctcgaaggcgtc
ctggagcgcatcacgtacgccaacgaggagaacgggtacacggtcgcccgggtcgacacc
ggcagaggcgccggcgacctgctgaccgtcgtcggcgcgctgctcggcgcccaggtcggg
gagtcgctgcggatggagggccgctggggatcgcacccccagtacggcaagcagttccac
gtggagaactacacgaccgtcctgcccgccaccgtccagggcatccggcgctacctcggc
tccggactggtcaagggcatcggaccggtcttcgccgaccgcatcacgcagcacttcggc
atcgacaccctcaggatcatcgaggaggagcccaagcggctcatcgaggtgcccggcctc
gggcccaagcgcaccaagaagatcgccgacgcctgggaggagcagaaggcgatcaaggag
gtcatgctcttcctccagaccgtcgaggtgtccacctccatcgcggtgcgcatctacaag
aagtacggcgacgcgtcgatctccgtggtgaagaaccagccctaccgcctcgccgccgac
gtctggggcatcggcttcctcaccgccgacaagatcgcccggtccgtcggcatcccgcac
gacagccccgaccgggtgaaggcggggctgcagtacgccctgtcgcaggccaccgaccaa
gggcactgctacctcccggaggagaagctgatcgccgacgcggtgaagctgctccacgtg
gacaccgggctcgtcatcgaatgcctgggcgagctggccgccgagccggagagtccggac
gacgaccccggcgtcgtgcgcgagaaggtccccgacccggagggcggcgaccccgtcacc
gccgtctacctcgtgcccttccaccgcgccgagctggccctggccggacagctgcgccgc
ctcctgcgcgccgacgtggaccggatgcccggcttccaggacgtggcctgggacaaggcg
ctcggctggctgaagcggcgcacgggtgccgacctcgcccccgagcaggaggcggccgtc
aagctcgccctcaccgagaaggtcgccgtcctcaccggcgggccgggctgcggcaagtcc
ttcacggtccggtcggtcgtggagctggcgcgggccaagaaggcgaaggtcgtcctggcc
gcgcccaccggccgcgccgccaagcgcctcgccgagctgaccggcgccgaggcgtccacg
gtccaccggctgctggagctcaagccgggcggtgacgccgcctacgaccgggaccggccc
ctcgacgccgacctcgtcgtggtggacgaggcatccatgctggacctcctgctcgccaac
aagctggtcaaggcggtggccccgggtgcgcacctgctcttcgtcggggacgtcgaccag
ctgcccagcgtgggggcgggggaggtgctgagggacctgctggctcccggcagccccgtc
cccgccgtccggctcacccgcgtcttccggcaggcccagcagtcgggggtggtgaccaac
gcgcaccggatcaacgccgggcagcacccgctcaccgacgggctgaaggacttcttcctc
ttcgtcgaggacgacacggaggaggcgggccggctcacggtcgatgtcgccgcgcggcgc
atccccgcgaagttcgggctcgacccgcgccgggacgtgcaggtgctcgcccccatgcac
cgcggaccggccggcgccggcacgctcaacgggctgctccagcaggccgtcacccccggc
cgccccgatctcgccgagaagcggttcggcggccgggtcttccgggtcggcgacaaggtc
acccagattcgcaacaattacgagaagggtgagaacggtgtcttcaacggcaccgtcggc
gtggtcacctcgctcgacccggtggaccagcgcctcaccgtgctgacggacgaggacgag
gaggttccgtacgaattcgacgaactggacgaactggcccacgcctacgcggtgaccatc
caccgttcccagggaagcgagtatcccgccgtggtgatcccggtgaccaccggcgcctgg
atgatgctccagcggaacctgctgtacacggcggtcacccgggccaagaagctggtcgtc
ctcgtcggctcccgcaaggcgatcggacaggcggtgcgcacggtctcggccggtcggcgc
tgcacggcgctcgacttccggctcgcgaccccctga
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