Streptomyces vinaceusdrappus: N6Q81_13295
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Entry
N6Q81_13295 CDS
T11167
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
svq Streptomyces vinaceusdrappus
Pathway
svq00040
Pentose and glucuronate interconversions
svq01100
Metabolic pathways
svq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
N6Q81_13295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N6Q81_13295
Enzymes [BR:
svq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
N6Q81_13295
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
nec1
Motif
Other DBs
NCBI-ProteinID:
UXI78943
UniProt:
A0ABY6BT43
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Position
complement(<2886149..2887237)
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AA seq
363 aa
AA seq
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MRRPVALRLHAALATLAVAAATGVVLTMPEAAAAASGATGYATQNGGTTGGAGGQTVRAT
TGTQIHQALCGRAGSSTPITIQVEGTINHGNTTKVSGDSCSTAADRIELKQISNVTIVGV
GGGAVFDQLGIHIRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESGVRNVWVDHTTLE
ASGGESEGYDGLFDMKDDTQYVTLSYSTLRNSGRGGLIGSSESDRSNGYVTFHHNLYENI
DSRAPLLRGGIAHMYNNHYKSLNESGINSRAGAKAKVDNNYFEDSKDVLGTFYTDQAGTW
QVSGNIYDNVTWSEREGDNNPAGPNPTSNTSVSIPYSYDLDAADCVPSVVSQTAGANKGL
KVS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagtcgcgctgcgactccacgccgcgctggccacgttggccgtcgcggcc
gcgaccggtgtggtgctgaccatgcccgaggcggcggcagcggccagtggcgccaccggc
tacgcgacccagaacggcggcacgaccgggggcgcgggcggccagacggtccgggccacc
accggcacccagatccaccaggccctgtgcggccgcgccggcagcagtaccccgatcacc
atccaggtcgagggcaccatcaaccacggcaacaccaccaaggtgtccggcgacagctgc
agcaccgcggccgacaggatcgagctgaagcagatcagcaacgtcacgatcgtcggggtc
ggcggcggtgccgtcttcgaccaactgggcatccacatccgggagtccagcaacatcatc
atccagaacgtgacggtccggaacgtcaagaagtcgggctcgcccacctccaacggcggc
gacgccatcggcatggagagcggcgtgcgcaacgtctgggtcgaccacaccaccctggag
gcctcgggcggggagtcggagggctacgacggcctcttcgacatgaaggacgacacccag
tacgtgaccctgtcctacagcaccctgcgcaactccggccgcggcggcctgatcggctcc
agcgagagcgaccgctccaacggctacgtcaccttccaccacaacctgtacgagaacatc
gactcccgcgcccccctcctgcgcggcgggatcgcccacatgtacaacaaccactacaag
agcctgaacgagtccggcatcaactcccgggccggcgccaaggccaaggtggacaacaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgaccaggccggcacctgg
caggtcagcggcaacatctacgacaacgtgacctggtccgagcgcgagggcgacaacaac
ccggccggcccgaacccgacgtccaacacctccgtcagcatcccgtactcctacgacctg
gacgcggccgactgcgtaccgagcgtcgtgagccagacggcgggcgccaacaaggggctg
aaggtgtcg
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integrated database retrieval system