Streptomyces vinaceusdrappus: N6Q81_16900
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Entry
N6Q81_16900 CDS
T11167
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
svq Streptomyces vinaceusdrappus
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svq03021
]
N6Q81_16900
Transcription machinery [BR:
svq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N6Q81_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
MarR
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
UXI79578
UniProt:
A0ABY6BVK3
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All DBs
Position
3640357..3641295
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AA seq
312 aa
AA seq
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MSADQGSSKVLALAESETAPDTLEALGPVGSIDSIDDGQAVDAVPTLDAVPAQALAAPEA
IDTRTLSRSLFLRLAALDEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVG
TIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASD
ELSQKLDRSPTVGELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLG
YEDTALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTR
TLAQLREGLISD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcgcgctcgcggagagcgagaccgcgccc
gacacgctcgaggcgctcggccccgtcggctccatcgactcgatcgacgatggtcaggcc
gtcgacgccgtaccgaccctcgacgccgtgccggcccaggccctcgcggccccggaggcc
atcgacacccgcaccctgtcccgctccctgttcctgcggctcgccgccctcgacgaggac
agccccgagcgtgcctacgtccgggacaccctgatcgaactcaacctcccgctggtgcgc
tacgcggcggcccgcttccgctcgcgcaacgagccgatggaggacatcgtccaggtcggc
accatcggcctgatcaaggcgatcgaccgcttcgactgcgagcggggcgtggagttcccg
accttcgccatgccgaccgtcgtcggcgagatcaagcggttcttccgggacacctcgtgg
tcggtacgcgtcccgcgccggctccaggagctgcgcctggccctgacgaaggccagcgac
gagctgtcgcagaagctggaccgctccccgaccgtcggcgagctggccgcggtgctcggc
gtctccgaggaggacgtcgtcgacggcctcgcggtgggcaacgcctacaccgcctcctcg
ctggactccccggccccggaggacgacggcggcgagggttcgctggccgaccgcctcggc
tacgaggacacggcgctggagggcgtggagtaccgcgagtccctcaagccgctgctggcc
aagctgccgccccgggagcggcggatcatcatgctgcgcttcttcgccaacatgacccag
tcgcagatcggcgaggaggtcggcatctcgcagatgcacgtctcccggctgctgacgcgc
accctcgcccagctgcgcgagggcctgatctccgactga
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