Streptomyces vinaceusdrappus: N6Q81_19820
Help
Entry
N6Q81_19820 CDS
T11167
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
svq Streptomyces vinaceusdrappus
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svq03016
]
N6Q81_19820
Enzymes [BR:
svq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
N6Q81_19820
Transfer RNA biogenesis [BR:
svq03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
N6Q81_19820
Prokaryotic type
tRNA splicing ligases
N6Q81_19820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UXI80107
UniProt:
A0ABY6BX36
LinkDB
All DBs
Position
4248381..>4249565
Genome browser
AA seq
395 aa
AA seq
DB search
MSYVEMPGAKVPIRMWADPATVEEGALQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQVIPVGRGMHDSPVDPG
RLHGLATAGWDDFWGRFDGVAEAVRFRQERAAKQMGTLGGGNHFVEVCVDTSDSVWLMLH
SGSRNIGKELAEHHIGIAQKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYAKYNR
TLMMALLKDVVRKEFKKAKPVFEPEISAHHNYVAEERYDGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNAKSFNSASHGAGRRMSRNAAKRRFSTKDLEEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAKLKQVVCV
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtggagatgccgggcgcgaaggtgccgatccggatgtgggccgatccggcg
acggtcgaggagggcgcgctccagcagctgcgcaacgtcgcgaccctgccgtggatcaag
ggcctggcggtcatgccggacgtgcactacggcaagggcgcgacggtcggctccgtgatc
gcgatgcggggcgcggtgtgtccggcggcggtgggtgtggacatcggctgcgggatgtcg
gcggtgcggacgtccctgacggcgaacgacctccccggtgacctctcgcggctgcggtcg
aagatcgagcaggtgattccggtggggcgggggatgcacgacagccccgtcgacccgggg
cgcctccacgggctggcgacggccgggtgggacgacttctgggggcggttcgacggggtc
gcggaggcggtccggttccggcaggagcgggcggccaaacagatgggcacgctcggcggc
ggcaaccacttcgtggaggtgtgcgtcgacacctccgactcggtctggctcatgctccac
tccggttcgcgcaacatcggcaaggagctggccgagcaccacatcggcatcgcccagaag
cttccgcacaaccagggcctggtcgaccgcgacctcgcggtgttcgtcgccgacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagtacaaccgc
accctgatgatggcgctcctcaaggacgtggtccgcaaggagttcaagaaggccaaaccg
gtcttcgagccggagatcagcgcccaccacaactacgtggccgaggagcgctacgacggg
atggacctgctcgtcacccgcaagggcgcgatccgggccggttccggcgagtacgggatc
atccccggctccatgggcacgggttcgtacatcgtgaagggtctcggcaacgccaagtcc
ttcaactccgcctcgcacggcgccggccggcgcatgagccgcaacgccgccaagcgccgc
ttctccaccaaggacctggaggagcagacgcggggcgtggagtgccgcaaggactccgga
gtcgtggacgagatcccgggcgcgtacaagccgatcgagcaggtcatcgaccagcagcgc
gacctcgtggaggtcgtggccaagctcaagcaggtcgtctgcgtg
DBGET
integrated database retrieval system
