Streptomyces vinaceusdrappus: N6Q81_23870
Help
Entry
N6Q81_23870 CDS
T11167
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
svq Streptomyces vinaceusdrappus
Pathway
svq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N6Q81_23870 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svq03021
]
N6Q81_23870 (rho)
03019 Messenger RNA biogenesis [BR:
svq03019
]
N6Q81_23870 (rho)
Transcription machinery [BR:
svq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
N6Q81_23870 (rho)
Messenger RNA biogenesis [BR:
svq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N6Q81_23870 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
AAA_22
ResIII
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
UXI80851
UniProt:
A0ABY6C034
LinkDB
All DBs
Position
5075877..5077979
Genome browser
AA seq
700 aa
AA seq
DB search
MSDTTDLMGARVEETAAAPATDASAPATGAGSRRRRGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAAGGAPAKAASAAADTAGETKPKRRATSRTRTGDEAPAEKAEKA
GKTEKAGKKTDRTAADKAAAQQQIEIPGQPSPKVSPSGEQAAAGDEAPAERRRRRATADA
GSPSAATETVAVETRGEPKADATAQQQGQGHQQGQGDARSDGEGGEGRRRDRRDRGRDRD
REGGRDGGRDRDGGRDRRGKGDDQNQGGQQGRQQGGGRQDRQQDDGYDDDGGGRRGRRGR
YRDRRGRRGRDDVQEPQIAEDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVR
KNGLRKGDHITGAVRQPKEGERREKFNALVRLDSVNGMAPEHGRGRPEFNKLTPLYPQDR
LRLETDPGVLTTRIIDLVAPIGKGQRGLIVAPPKTGKTMIMQAIANAITHNNPECHLMVV
LVDERPEEVTDMQRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSI
TRLGRAYNLAAPASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVDTGSRM
DEVIFEEFKGTGNAELKLDRKLADKRIFPAVDVDASGTRKEEILLGSDELAITWKLRRVL
HALDQQQAIELLLDKMKQTKSNAEFLMQIQKTTPTPGNGD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgcacgtgtcgaggagaccgctgccgcgcccgcc
acggacgcctccgcgcctgccaccggtgccggctcccggcggcgccgcggtaccggcctc
gagggcatggtgctggccgagctgcagcaggtcgcatccggcctcggcatcaggggcacc
gcgcgcatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggccgccggggga
gcccccgcgaaggccgcgtccgccgccgcggacaccgccggcgagaccaagcccaagcgc
cgcgccacctcccgtacccgtacgggcgacgaggcccccgccgagaaggcggagaaggcc
ggcaagacggagaaggccgggaagaagacggacaggacggccgccgacaaggccgccgcc
cagcagcagatcgagatccccggccagccctcgcccaaggtctccccgtcgggcgagcag
gccgccgccggtgacgaggcccccgccgagcgccgtcgccgccgggccaccgccgacgcg
ggcagcccgtccgccgccaccgagacggtggccgtggagacccgcggcgagccgaaggcc
gacgcgacggcccagcagcagggccagggccaccagcaggggcagggcgacgcccgctcc
gacggcgagggcggcgagggccgtcgtcgcgaccgccgcgaccgcggccgggaccgtgac
cgcgagggcggccgtgacggtggccgtgaccgcgacggtggccgcgaccgccgtggcaag
ggcgacgaccagaaccagggcggtcagcagggccgtcagcagggcggcggccggcaggac
cgccagcaggacgacggctacgacgacgacggcggcggtcgccgcggccgtcgcggccgc
taccgggaccgccggggccgtcgcgggcgcgacgacgtgcaggagccgcagatcgccgag
gacgacgtcctgatccccgtcgcgggcatcctggacatcctcgacaactacgcgttcatc
cgcacctccggctacctgccgggcccgaacgacgtgtacgtctccctcgcccaggtccgc
aagaacggcctgcgcaagggcgaccacatcaccggcgcggtccgccagcccaaggaaggc
gagcggcgcgagaagttcaacgccctcgtccggctcgactccgtcaacggcatggcgccc
gaacacggccgcggccgcccggagttcaacaagctgacgccgctgtacccgcaggaccgc
ctccgcctggagacggacccgggcgtcctcaccacccgcatcatcgacctcgtcgcgccg
atcggtaagggccagcgcggtctgatcgtggccccgccgaagaccggcaagaccatgatc
atgcaggcgatcgccaacgcgatcacgcacaacaaccccgagtgccacctgatggtcgtc
ctggtcgacgagcgtccggaagaggtcaccgacatgcagcggtcggtgaagggcgaggtc
atctcctcgaccttcgaccgcccggccgaggaccacaccacggtcgccgagctggccatc
gagcgcgccaagcgcctggtggagctgggtcacgacgtcgtcgtgctgctcgactcgatc
acccgcctgggccgcgcgtacaacctcgccgccccggcctccggccgcatcctctccggt
ggtgtcgactcgaccgccctgtacccgccgaagcgcttcttcggtgcggcccgcaacatt
gaggacggcggttcgctgaccatcctcgccaccgccctggtggacaccgggtcccgcatg
gacgaggtcatcttcgaggagttcaagggcaccggcaacgccgagctgaagctcgaccgg
aagctcgccgacaagcgcatcttcccggcggtggacgtcgacgcgtccggcacccgcaag
gaggagatcctgctcggcagcgacgagctggccatcacctggaagctgcgtcgcgtgctg
cacgcgctcgaccagcagcaggcgatcgagctgcttctcgacaagatgaagcagaccaag
tcgaacgccgagttcctgatgcagatccagaagacgacgccgacgccgggcaacggcgac
tga
DBGET
integrated database retrieval system
