Streptomyces vinaceusdrappus: N6Q81_25640
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Entry
N6Q81_25640 CDS
T11167
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
svq Streptomyces vinaceusdrappus
Brite
KEGG Orthology (KO) [BR:
svq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svq03009
]
N6Q81_25640 (rimO)
Enzymes [BR:
svq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N6Q81_25640 (rimO)
Ribosome biogenesis [BR:
svq03009
]
Prokaryotic type
ribosomal protein modification factors
N6Q81_25640 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UXI81172
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Position
5467056..5468546
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AA seq
496 aa
AA seq
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MPESRTVALVTLGCARNEVDSEELAGRLEADGWKLVDDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
SGGIHAAHTPRDRRKLLPISPAERQEAGASVALPGHAPADLPEGVAPASGPRAPLRRRLD
GAPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPNLAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYFDLSF
QHSAPNVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGESDSDLAELERFLN
HARLDAIGVFGYSDEEGTEAATYDDKLDEDVVAERLARVSRLAEELVSQRAEERVGATVR
VLVESVESADSADEGDGVRGRAEHQAPETDGQVLLTSGEGLRVGSMVEAKVVGTEGVDLV
AEPLPVSPAWSEEAGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagccgcaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtctggaggcggacggctggaagctcgtcgacgacgccgag
gaagcggacgtcgccgtcgtgaacacgtgcggcttcgtcgaggccgccaagaaggactcc
gtggacgccctcctggaggccaacgacctcaagggccacggaagaacgcaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctggccgaggccctgcccgaggcc
gacggcgtcctcggcttcgacgactacgccgacatctccgaccgcctgcagaccatcctc
agcggcggcatccacgccgcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
cccgccgagcgccaggaggccggtgcctccgtcgccctgcccgggcacgcgccggccgac
ctccccgagggcgtcgcgcccgcctccggcccacgcgctccgctccgtcgccgcctggac
ggtgcgccggtcgcctccgtgaagctggcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgccccagcgacgtgctgaacgag
acgcggtggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtccctgctgccgaacctggcc
gaggtcgacggcatcgagcgggtgcgggtcagctacctccagccggccgagatgcgcccc
ggtctgatcgacgtcctgacctccacgcccaaggtggtgccctacttcgacctctccttc
cagcactccgcgccgaacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggagctgctggacaccatccggagcaaggcgcccgaggccggcgtgcgctccaacttc
atcgtgggcttccccggcgagagcgactccgacctcgccgagctggagcggttcctgaac
cacgcgcggctggacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacgacgacaagctggacgaggacgtcgtcgccgagcggctggcacgggtctcc
cgcctcgccgaggaactcgtctcgcagcgcgccgaggagcgcgtgggcgccaccgtgcgg
gtcctcgtggagtccgtggagtccgccgactccgccgacgagggggacggcgtccggggc
cgcgccgagcaccaggcacccgagaccgacggccaggtgctgctcacgagcggcgaaggt
ctgcgggtcggaagtatggtcgaggcgaaggtggtcggtacggagggtgtcgatctggtg
gccgagccgctgccggtgtcgcccgcgtggagtgaggaggccggcagatga
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