Streptomyces viridifaciens: CP971_09635
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Entry
CP971_09635 CDS
T06960
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
svr
Streptomyces viridifaciens
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svr03016
]
CP971_09635
Enzymes [BR:
svr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CP971_09635
Transfer RNA biogenesis [BR:
svr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CP971_09635
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QEU99526
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All DBs
Position
2187730..2188980
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AA seq
416 aa
AA seq
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MTDAVAAIPEEAAPVPLLEPKEGIPPVVADEQALAATIAAFAAGTGPVAVDAERASGYRY
GQRAYLIQLRRAGAGSALIDPIACPDLGRLGAAIADAEWVVHAATQDLPCLAEVGMRPTR
LFDTELAGRIAGFARVGLGPMTENVLGLSLAKEHSAVDWSTRPLPEPWLRYAALDVEVLV
ELRDALEQELDAQGKLDWALEEFASIAAAPRPAPRTDPWRRTSQLHKVRRRRQLAVVREL
WLTRDRMAQERDVSPGRVLSDAAIVNAALAMPLNIAALQAVQGFGPRLHRRQLDQWLAAV
QRGREVPENQLPPAAAPHDGPPPPRAWAEKDPVAAARLSGARAAVSELAERHHLPAENLI
TPDLVRRVSWEPPADPSAEGVAAALRRLGARQWQVDLVAPVMAAAFATATAATAQG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgccgtagcagccatcccagaagaagcagccccggtcccgctcctcgaaccg
aaggaggggatcccgcccgtcgtggcggacgagcaggcgctggccgccacgatcgccgcc
ttcgccgcgggcaccggaccggttgccgtcgacgccgagcgcgcctccggctaccgctac
gggcagcgggcgtacctgatccagctgcgccgtgccggcgccggctcggccctgatcgac
ccgatcgcctgccccgacctcggcaggctgggcgccgccatcgcggacgccgagtgggtg
gtgcacgccgcgacccaggacctgccctgcctggccgaggtgggcatgagacccacccgg
ctgttcgacaccgagctggccgggcggatcgcgggcttcgcccgggtcggtctcgggccg
atgaccgagaacgtgctcgggctgagcctggccaaggagcactcggcggtggactggtcc
acccgcccgctgcccgagccctggctgcgctacgcggctctggacgtcgaggtgctggtc
gagctgcgtgacgcactcgaacaggagctggacgcccagggcaagctcgactgggcgctg
gaggagttcgcctcgatcgccgccgccccgcgcccggccccgcgcaccgacccgtggcgc
cgcacctcgcagctgcacaaggtccgccggcgccgccagctggccgtggtgcgcgagctg
tggctgacccgtgaccggatggcgcaggagcgcgacgtctcccccggccgggtgctctcg
gacgccgcgatcgtcaacgccgcgctggccatgccgctgaacatcgcggcccttcaggcc
gtgcagggcttcggcccgcgcctgcaccggcgccagctggaccagtggctggcggccgtg
cagcgcggccgggaggtcccggagaaccagctgccgccggccgccgcaccgcacgacggt
ccgccgccgccgcgggcctgggcggagaaggacccggtggccgccgcccggttgtccggc
gcccgcgccgcggtcagcgagctggccgagcgtcaccatctgccggccgagaacctgatc
actccggacctggtgcgtcgggtctcctgggagccgccggccgacccgagcgccgagggc
gtggccgccgcgctgcgccggctcggcgcccggcagtggcaggtcgacctggtggcaccg
gtgatggccgccgccttcgccaccgccaccgccgccacggcccagggttga
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