Streptomyces viridifaciens: CP971_10210
Help
Entry
CP971_10210 CDS
T06960
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
svr
Streptomyces viridifaciens
Pathway
svr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP971_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svr03400
]
CP971_10210
Enzymes [BR:
svr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CP971_10210
DNA repair and recombination proteins [BR:
svr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CP971_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PhoH
nSTAND3
PIF1
NPHP3_N
TraI_hel_assoc_N
UvrD-helicase
HTH_IclR
DAP3
AAA_10
AAA_16
UvrD_C
DEAD
DUF87
AAA
P-loop_TraG
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QEU99625
LinkDB
All DBs
Position
complement(2351467..2353701)
Genome browser
AA seq
744 aa
AA seq
DB search
MGKQAQSGQQVPHQLAQVEGVLERITYANEETGYTVARVDTGRGGNDLLTVVGALLGAQV
GESLRLHGRWGSHPQYGRQFTVENYTTVLPATVQGIQRYLGSGLIKGIGPRFAERIVERF
GVDTLEVIENEPGRLIEVPGLGPKRTRKIAEAWDEQKAIKEVMVFLQGVGVSTSLAVRIY
KQYGDASIGVVKNEPYKLASDVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSSD
QGHCYLPEERLIADGVKLLQVDVGLVIDCLAELVAAEGVVRETVPGEAGEPITAIYLVPF
HRAEISLANQLLRLLRSDSDRLPWSAEVDWPVALDWLAKRTGTELAPEQQQSVRLALTRK
VAVLTGGPGCGKSFTVKSIVMMALAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLEL
KPGGDAAYDRDRPLDADLVVVDEASMLDLILANKLVKAVPPGAHLLFVGDVDQLPSVGAG
EVLRDLLAEGGPIPSVRLTRIFRQAQQSGVVVNAHRINEGKPPLTEGLADFFLFAEEDTE
RAAGLTVDVVARRIPQKFGFDPRRDVQVLAPMHRGPAGAGNLNTLLQGAVTPAREGLAER
RFGGRTFRVGDKVTQIRNNYDKGRNGVFNGTVGVVTALSVDDQRLTVLTDEDEEVSYDFD
ELDELSHAYAVTIHRSQGSEYPVVVIPVTMSAWTMLQRNLLYTAVTRARKLVVLVGSRKA
IAQAVRAVSAGRRHAALDHRLASG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaagcaggcgcagtcggggcagcaggtcccgcaccaactcgcgcaggtcgagggc
gtgctggagcggatcacctatgccaacgaggagaccggttacacggtggcgcgggtggac
accggccggggcgggaacgacctgctgacggtggtgggcgcgctgctgggggcgcaggtc
ggcgagtcgctgcggctgcacgggcggtggggttcgcacccgcagtacgggcggcagttc
acggtggagaactacacgacggtgctgccggccacggtgcagggcatccagcggtacctg
ggctcggggctgatcaaggggatcgggccgcggttcgccgagcggatcgtggagcgcttc
ggggtggacaccctggaggtgatcgagaacgagccgggtcggctgatcgaggtgccgggg
ctgggaccgaagcgcaccaggaagatcgccgaggcctgggacgagcagaaggccatcaag
gaggtgatggtcttcctccagggggtcggggtgtcgacctccttggcggtccggatctac
aagcagtacggggacgcctcgatcggggtggtgaagaacgagccgtacaagctggcttcg
gacgtctggggcatcggcttcctgacggcggaccggatcgcgcaggcggtgggcatcccg
cacgacagcccggagcgggtgaaggccgggctgcagtacgcgctgtcgcagagcagcgac
caggggcactgctacctgccggaggagcggctgatcgcggacggcgtgaagctgttgcag
gtggacgtggggctggtgatcgactgcctggcggagctggtcgcggccgagggggtggtg
cgcgagacggtgccgggggaggcgggcgagccgatcaccgcgatctacctggtgccgttc
caccgggcggagatctcgctggccaaccagctgctgcgactgctccgttcggactccgac
cgcctgccgtggtccgccgaggtggactggccggtggcgctggactggctggcgaagcgg
acggggacggagctggcgccggagcagcagcagtcggtgcggctggcgctgacccgcaag
gtcgcggtgctgacgggtggtccgggctgcggcaagtcgttcacggtgaagtcgatcgtg
atgatggcgctggccaaacgggcgaaggtggtgctggcggcgccgaccggccgggcggcg
aagcggctggcggagctgaccggggcggaggcctcgacggtgcaccggttgctggagctg
aagccgggcggggacgccgcctacgaccgggaccggccgctggacgcggacctggtggtg
gtggacgaggcgtcgatgctggacctgatcctggcgaacaagctggtcaaggcggtgccg
ccgggcgcccatctgctgttcgtgggggacgtggaccagctgccctcggtgggtgccggg
gaggtgctgcgggacctgctggcggagggcgggccgatcccgtcggtgcggctgacccgg
atcttccggcaggcgcagcagtccggagtggtggtcaacgcgcaccggatcaatgagggg
aagccgccgttgacggagggtctggcggacttcttcctgttcgccgaggaggacacggag
cgggcggccggtctgacggtggacgtggtggcgcgtcggatcccgcagaagttcggcttc
gatccgcgccgggacgtgcaggtgctggcgccgatgcaccgtggcccggccggggcgggg
aacctgaacacgctgttgcagggcgcggtgacgccggcccgggaggggctggcggagcgg
cggttcggcgggcggacgttccgggtgggggacaaggtcacccagatccgcaacaactac
gacaaggggcggaacggcgtcttcaacggcacagtgggagtggtgaccgccctcagcgtg
gacgaccagcggctgacggtgctcaccgacgaggacgaggaggtgtcgtacgacttcgac
gaactggacgagctgtcacacgcgtacgcggtgacgatccaccgctcgcagggcagtgag
tatccggtggtggtgattccggtcacgatgtccgcttggacgatgctccagcgaaatctg
ctctacaccgctgtgaccagggcgaggaaactcgtggtgctggtggggtcacggaaggcg
atcgcgcaggccgtgagggccgtcagtgcaggtcggcggcatgccgcgctcgatcatcga
cttgcttctggatga
DBGET
integrated database retrieval system
