Streptomyces viridifaciens: CP971_10775
Help
Entry
CP971_10775 CDS
T06960
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
svr
Streptomyces viridifaciens
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svr03009
]
CP971_10775 (rimO)
Enzymes [BR:
svr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CP971_10775 (rimO)
Ribosome biogenesis [BR:
svr03009
]
Prokaryotic type
ribosomal protein modification factors
CP971_10775 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QEU99710
LinkDB
All DBs
Position
complement(2488238..2489743)
Genome browser
AA seq
501 aa
AA seq
DB search
MPERRTVALVTLGCARNEVDSEELAGRLEADGWLLVDDAAEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISDRLQTIL
SGGHHAPHIPRDRRKLLPISPADRQSAAEAVALPGHGAEAAAEPITDLPEGLAPASGPRT
LRKRLDDSPVASVKLASGCDRRCSFCAIPAFRGSFISRRPSDVLNEAQWLAGQGVREIVL
VSENNTSYGKDLGDIRLLETLLGEISAIEGVERVRVSYLQPAEMRPGLIDAMTGTADVVP
YFDLSFQHSAPAVLRRMRRFGSTDQFLELLGTIRGKAPQAGARSNFIVGFPGETEEDFAE
LERFVTHAGLDAIGVFGYSDEDGTEAATYDGKLPEDVVADRLDRLSRLAEEMTAQRAEQR
IGTEVEVLIESVEDGVVEGRSAHQAPETDGLTTLHGVEDPKVGQFWRATVVASEGVDLIA
EALEQVRPLRTAGAEAPGAGE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgcactgtcgcccttgtcacgctcggatgcgcccgcaacgaggtggac
tccgaggaactcgccgggcgactggaagccgacggctggttgctcgtcgacgatgccgcc
gaggccgatgtcgccgtcgtcaacacctgcggcttcgtcgaagccgccaagaaggactcc
gtcgacgccctgctggaggccaacgacctcaaggggcacggccgcacccaggccgtcgtc
gcggtcggctgcatggccgagcggtacggcaaggaactcgccgacgcgctgcccgaggcc
gacggggtgctcggcttcgacgactacgcggacatctccgaccgcctgcagaccatcctc
tccggcggtcaccacgccccgcacatcccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgatcggcagtccgccgccgaggccgtcgcgctgcccggtcacggcgccgaggcc
gccgccgagccgatcaccgacctgcccgagggcctcgccccggcctccggcccgcgcacc
ctgcgcaagcggctggacgacagcccggtcgcctcggtcaagctcgcctccggctgcgac
cggcgctgctccttctgcgccatcccggccttccgcggctccttcatctcccgccgcccc
tccgacgtgctgaacgaggcccagtggctggccgggcagggcgtccgcgagatcgtcctg
gtcagcgagaacaacacctcgtacggcaaggacctcggcgacatccggctgctggagacg
ctgctcggcgagatctccgcgatcgagggcgtcgagcgggtgcgggtgtcctacctgcag
ccggccgagatgcgccccggtctgatcgacgcgatgaccgggaccgccgacgtggtgccc
tacttcgacctgtccttccagcactcggcgcccgccgtgctgcgccggatgcgccgcttc
ggctccaccgaccagttcctggagctgctggggaccatccggggcaaggccccgcaggcc
ggtgcccggtccaacttcatcgtcggcttcccgggggagaccgaggaggacttcgccgag
ctggagcgcttcgtcacccacgcagggctggacgcgatcggcgtcttcggctactccgac
gaggacggcaccgaggccgccacctacgacggcaagctgcccgaggacgtcgtcgccgac
cggctggaccggctgagccggctcgccgaggagatgaccgcccagcgggccgagcagcgg
atcggcaccgaggtcgaggtgctgatcgagtcggtcgaggacggcgtggtcgagggccgc
tccgcccaccaggccccggagaccgacggcctgaccaccctgcacggcgtcgaggacccg
aaggtcggacagttctggcgggccaccgtggtggccagcgagggcgtcgacctgatcgcc
gaggcgctggagcaggtgcgaccgctcaggaccgcgggggccgaggctccgggagccggg
gaatga
DBGET
integrated database retrieval system
