Streptomyces viridifaciens: CP971_12000
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Entry
CP971_12000 CDS
T06960
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
svr
Streptomyces viridifaciens
Pathway
svr00300
Lysine biosynthesis
svr00470
D-Amino acid metabolism
svr01100
Metabolic pathways
svr01110
Biosynthesis of secondary metabolites
svr01120
Microbial metabolism in diverse environments
svr01230
Biosynthesis of amino acids
Module
svr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CP971_12000 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CP971_12000 (lysA)
Enzymes [BR:
svr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CP971_12000 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEU99915
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All DBs
Position
complement(2788812..2790203)
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHGDVLPEGHYQAPPADLNALDPKVWSCTVARNAEGAATVGGIDVRRLAA
EFGTPAYVLDEEDFRARARAWRDAFGAGADVYYAGKAFLSKAIVRWLHEEGLNLDVCSVG
ELAVALAAGMPPERIALHGNNKSADELEHAVKTGVGHIVVDSYEEIERLAAIAARHGVRQ
QVLIRVTVGVEAHTHEFIATAHEDQKFGLSLNGGAAAEAVRRVLGHDSLELRGIHSHIGS
QIFDMAGFEVAARRVVGLLAGIRDEHGVELPEIDLGGGLGIAYTSEDDPREPAEIAAALA
EIVRRECAAANLNAPRLSVEPGRAIVGPTAFTLYEVGTVKPLEGLRTYVSVDGGMSDNIR
TALYDAEYSVALVSRTSEAAPMLVRVVGKHCESGDIVVRDAFLPSDLVPGDLIAVPATGA
YCRSMASNYNHALRPPVLAVRDGAARVIVRRETEEDLLRLDIG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctccgcacatcccgccgggccccgccacggcgacgtcctgcccgagggccac
taccaggccccgccggccgacctgaacgcgctcgatcccaaggtctggtcgtgcaccgtc
gcccgcaacgccgagggcgcggccaccgtcggcgggatcgacgtgaggcgactggcggcc
gagttcggcaccccggcctacgtgctggacgaggaggacttccgcgcccgggcccgcgcc
tggcgggacgccttcggcgccggcgcggacgtctactacgccggaaaggccttcctctcc
aaggcgatcgtgcgctggctgcacgaggagggcctcaacctcgacgtgtgcagcgtcggc
gagctcgcggtggcgctggccgccgggatgccgccggagcggatcgcgctgcacggcaac
aacaagtcggccgacgagctggaacacgcggtgaagaccggtgtcgggcacatcgtggtc
gactcctacgaggagatcgagcggctggccgcgatcgccgcccgccacggcgtgcgccag
caggtgctgatccgggtcaccgtcggcgtcgaggcgcacacccacgagttcatcgcgacg
gcgcacgaggaccagaagttcggcctctcgctgaacggcggggccgccgccgaggcggtg
cgccgggtgctcggccacgacagcctggaactgcgcggcatccactcgcacatcggctcg
cagatcttcgacatggccggcttcgaggtggccgcccgccgggtggtcggcctgctggcc
gggatccgggacgagcacggcgtcgagctgcccgagatcgacctcggcggcggcctcggc
atcgcctacaccagcgaggacgacccgcgcgagcccgccgagatcgccgccgccctggcc
gagatcgtccgccgcgagtgcgccgccgcgaacctgaacgccccccggctgagcgtggag
ccgggccgggcgatcgtcggcccgaccgcgttcacgctgtacgaggtcggcacggtcaag
ccgctggagggcctgcgcacctacgtcagcgtggacggcgggatgtccgacaacatccgc
accgcgctgtacgacgccgagtactcggtggccctggtgtcccgcaccagcgaggccgcg
ccgatgctggtccgggtggtcggcaagcactgcgagtccggcgacatcgtcgtccgggac
gccttcctgccctccgacctggtcccgggcgacctgatcgcggtgcccgccaccggcgcc
tactgccgctcgatggcgagcaactacaaccacgccctcaggccccccgtgctcgccgtc
agggacggtgcggcgcgggtgatcgtccggcgcgagacggaggaggatctcctgcgcctg
gatatcggatga
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