Streptomyces viridifaciens: CP971_12640
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Entry
CP971_12640 CDS
T06960
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svr
Streptomyces viridifaciens
Pathway
svr03420
Nucleotide excision repair
svr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP971_12640
03430 Mismatch repair
CP971_12640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svr03400
]
CP971_12640
Enzymes [BR:
svr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP971_12640
DNA repair and recombination proteins [BR:
svr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP971_12640
MMR (mismatch excision repair)
Other MMR factors
CP971_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEV00019
LinkDB
All DBs
Position
complement(2935312..2938542)
Genome browser
AA seq
1076 aa
AA seq
DB search
MTAVLSHPDQLKELLGIPFNREQTAAIGAPLAPAVIVAGAGSGKTTVMAARVVWLVGSGA
VRPEEVLGLTFTNKAAGELAERVRTALLQAGVADRDDTEPLGEPEISTYHAFAGRLLKEH
GLRIGIEPDVRLLADATRFQLAAKVLRTARGPFPALTGTFANLVADLTALDGELAEHLVE
PAALRAYDEELLDTLATVKLGNDDLRAVPATARARLELLRLVEDYRRRKQAAGLMDFGDQ
IAAAARLAQQRPEVGALLRGQFKVVLLDEYQDTSVAQRLMLAGLFGASRDGAGATGHPVT
AVGDPCQAIYGWRGASVANLDDFPRHFPQADGRPAERYALSENRRSGGRLLAFANELAAP
LRAMHEGVEALRPAPGAEQDGYVRAALLPTHAEEIDWLADSIAHLVRTGTAPGRIAVLCR
GGAAFPDIHAALVAREVPVEVVGLGGLLQLPEVADLVAVCEVLQDPTANAALVRLLIGPR
WRIGPRDLALLGRRAAELVRTERPEGVEALAAAVAEADPTEVVSLADAVETFLTAPTGEQ
GDPSDDLPFSAEARVRFARLAAELRELRRSLADPLMDVLHRVLTVTGLEVELAASPQALA
ARRRETLHAFLDVAASFADLDGDPGLAAFLGFLRAAQEYERGLDSSLPGGEDTVKVLTAH
KSKGLEWDVVAVPGLVKGAFPSGTARERWTSTKRVLPHALRGDAATLPDVRGGWTSKSMA
AFKKELAEHSGTEELRLGYVAFTRPRSLLLASGHWWGPSQKTVRGPSAFLEQLRAHCEQP
GAGEVEHWAEPPEKGAVNPALAAAVERPWPLPLDPAAQHARRRVAEVVRGRIGGAPAPEP
EPMAAEDQRQVASWDRDLTALLGELERSRRTAREVPLPPALSATQLLRLAADPDGFARDL
ARPMPRPPQPAARRGTRFHAWVQSRIEPLLLIEPGALPGADDDGIEDEQDLERLKEAFLR
TPYAERRPHRVEAPFQLVLAGRVVRGRIDAVYRDGDGLTESGGASRYEVVDWKTHREETA
DPLQLAVYRLAWAEQAGVDPEQVTASFLYVRSGRIVRPEGLPDRKELERLLIGNSD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgtgctcagccatcccgaccagctcaaggagctgctgggcatcccgttcaac
cgggaacagacggcggccatcggcgcccccctggcccccgccgtgatcgtggccggcgcc
ggctccggcaagaccaccgtgatggccgcccgcgtcgtctggctggtcggctccggcgcc
gtacgccccgaggaggtgctcggcctcaccttcaccaacaaggccgccggcgaactcgcc
gaacgcgtccgcaccgccctgctgcaggccggcgtcgccgaccgggacgacaccgaaccg
ctcggcgaacccgagatctccacctaccacgccttcgccggccgcctgctcaaggaacac
ggcctgcgcatcggcatagagccggacgtgcggctgctcgccgacgccacccgcttccag
ctcgccgccaaggtgctgcgcaccgcccgcggccccttccccgccctcaccggcaccttc
gccaacctcgtcgccgacctgaccgccctggacggcgaactcgccgaacacctggtcgag
cccgccgccctgcgcgcgtacgacgaggaactgctcgacaccctcgccaccgtcaagctg
ggcaacgacgacctgcgggccgtccccgccaccgcccgcgcccgactggaactgctgcgc
ctggtcgaggactaccgccgccgcaagcaggccgccggactgatggacttcggcgaccag
atagccgccgccgcccgcctcgcccagcagcgccccgaggtcggcgccctgctgcgcggc
cagttcaaggtcgtcctgctcgacgagtaccaggacacctccgtcgcccagcggctcatg
ctcgccggactcttcggggcctcccgggacggcgccggcgccacgggccacccggtgacc
gccgtcggcgacccctgccaggccatctacggctggcgcggcgcctccgtcgccaacctc
gacgacttcccccggcacttcccgcaggccgacggccgccccgccgagcgctacgcgctc
agcgagaaccggcgcagcggcggacgcctgctcgccttcgccaacgaactcgccgccccg
ctgcgcgccatgcacgagggcgtcgaggcgctgcgcccggcccccggcgccgaacaggac
ggctacgtgcgggccgcgctgctgcccacccacgccgaggagatcgactggctcgccgac
tcgatcgcccacctggtgcgcaccggcaccgcgcccggtcggatcgccgtgctgtgccgg
ggcggcgccgccttcccggacatccacgccgcgctcgtcgcccgcgaggtgccggtcgag
gtggtgggcctcggcggcctgctgcaactgcccgaggtggccgacctggtggcggtctgc
gaggtgctgcaggacccgaccgccaacgccgccctggtgcgcctgctgatcggcccgcgc
tggcggatcggcccgcgcgacctcgccctgctcggccgccgggccgccgaactggtgcgc
accgagcggcccgagggcgtggaggcgctggccgcggccgtcgccgaggccgacccgacc
gaggtggtgtcgctcgccgacgcggtggagaccttcctcaccgccccaaccggtgagcag
ggggatccgagcgacgacctgccgttctccgccgaggccagggtgcgcttcgcccggctc
gccgccgaactgcgcgaactgcgccgctcgctcgccgacccgctgatggacgtgctgcac
cgggtgctgaccgtcaccggcctggaggtcgaactcgcggcctccccgcaggcgctggcc
gcccggcgccgggagaccctgcacgccttcctggacgtcgccgcctccttcgccgacctg
gacggtgacccgggcctggccgccttcctcggcttcctgcgcgccgcccaggagtacgag
cgcggcctggacagcagcctgcccggcggcgaggacaccgtgaaggtgctcaccgcgcac
aagtccaagggcctggagtgggacgtggtggccgtccccggcctggtgaagggcgcgttc
ccgtccggcaccgcacgcgaacgctggaccagcaccaagcgggtgctcccgcacgccctg
cgcggcgacgccgccaccctgcccgacgtgcgcggcggctggacgagcaagtcgatggcc
gcgttcaagaaggagctggccgagcactccggcaccgaggaactgcgcctgggctacgtc
gcgttcacccgcccccgctcgctgctgctggcctccgggcactggtgggggccgagccag
aagaccgtccgcggcccctccgccttcctggagcagctgcgcgcgcactgcgagcagccc
ggcgccggcgaggtcgagcactgggccgagccgccggagaagggcgccgtgaacccggcg
ctggccgccgccgtcgaacgcccctggccgctgccgctggacccggccgcccagcacgcc
cgccgccgggtcgccgaggtggtgcgcggcaggatcgggggagcgcccgctcccgaaccg
gagccgatggccgccgaggaccagcgccaggtcgcctcctgggaccgcgatctcaccgcg
cttctgggcgagttggagcgctcccggcgcaccgcccgggaggtgccgctgccgcccgcg
ctgtccgccacccagctgctgcgactggccgccgacccggacggcttcgcccgcgacctg
gcccgcccgatgccgcgcccgccgcagcccgcggcccggcgcggcacccgcttccacgcc
tgggtgcagtcccggatcgagccgctgctgctgatcgagcccggcgcgctgcccggcgcc
gacgacgacggcatcgaggacgagcaggacctggaacggctcaaggaggcgttcctgcgc
accccgtacgccgagcgcaggccccaccgggtcgaggcgcccttccaactggtgctggcg
gggcgggtggtgcgcggccggatcgacgcggtctaccgggacggtgacgggctgacggaa
tccggtggtgcgtcacgctacgaagtggtggactggaagacccaccgcgaggagacggcc
gacccgctgcagctcgcggtctaccggctcgcctgggccgagcaggcgggcgtcgatccc
gagcaggtcacggcctcgttcctgtacgtccgcagcggacggatcgtacgaccggaagga
cttcccgaccgaaaagagttggaacggctcctgatcgggaacagtgactaa
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