Streptomyces viridifaciens: CP971_14315
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Entry
CP971_14315 CDS
T06960
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
svr
Streptomyces viridifaciens
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svr03016
]
CP971_14315 (thpR)
Enzymes [BR:
svr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CP971_14315 (thpR)
Transfer RNA biogenesis [BR:
svr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CP971_14315 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QEV00299
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All DBs
Position
complement(3313290..3313889)
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AA seq
199 aa
AA seq
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MRLFVAVLPPVAALQGLSDAVAPVRGLPGADRLRWTTVEDWHLTLAFLGEVAEDRLTELT
TGLAAVAEATPAHRLRLAGAGRFGDRVLWAGVGGQTWALRRLAEAVYGATEDITAEVDAF
GFHPHLTLARAGSSRGRRRAERRASAAEVEALVAALAGYRGPDWEAAELHLMRSDQGGGG
GPHYESVRAWSLARWAAYP
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgttcgtggcggtactgccgccggtcgcggcgttgcaggggctctcggacgcg
gtcgcgccggtgcgcgggctgcccggggcggaccggctgcgctggaccacggtcgaggac
tggcacctcacgctggccttcctcggggaggtcgccgaggaccggctgacggagctgacg
acgggcctggccgcagtcgccgaggcgaccccggcgcaccgcctgcgactcgcgggggcc
gggcgcttcggcgaccgggtgctctgggccggggtcggagggcagacctgggcgctgcga
cggctcgccgaggccgtgtacggggccactgaggacatcaccgccgaggtggacgcgttc
ggcttccacccgcacctgacgctggcccgggccgggtcctcgcgcgggcggcggcgggcc
gagcggcgggcgtcggcggccgaggtggaggcgctggtggccgcgctggccgggtaccgg
gggccggactgggaggccgccgaactgcacctgatgcggagcgatcagggcggtggcggc
ggcccgcactacgagtcggtgcgcgcctggtcgctggcgcgctgggcggcgtacccgtaa
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