Streptomyces viridifaciens: CP971_16440
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Entry
CP971_16440 CDS
T06960
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
svr
Streptomyces viridifaciens
Pathway
svr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CP971_16440 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svr03400
]
CP971_16440 (recF)
DNA repair and recombination proteins [BR:
svr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CP971_16440 (recF)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
AAA_16
SbcC_Walker_B
ABC_tran
AAA
Motif
Other DBs
NCBI-ProteinID:
QEV00643
LinkDB
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Position
complement(3776375..3777508)
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AA seq
377 aa
AA seq
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MHVAHLSLADFRSYARAEVPLDPGVTAFVGPNGQGKTNLVEAIGYVATLGSHRVATDAPL
IRLGAERAVIRTSVVDRGRSTLVELELTPGKANRARINRSDNVRPRDVLGLLRTVLFAPE
DLSLVKGDPGERRRFLDELLTARAPRLAGVRQDYERVLKQRNALLKTAAMARRAGGGKGA
DLSTLEVWDGHLARAGAELTAFRIQLVAALQPLVTAAYGQLAPGGGETALEYRSSFEGEL
PTSREQAEEQLLQALQAVRKQEVERGITLVGPHRDELVLKLGPLPAKGYASHGESWSFAL
ALRLASYELLRADGGEPVLILDDVFAELDAARRDRLAELVADGEQVLVTAAVAEDVPKAL
AGARFAVSDGAVRRIDA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgcgcacctgtcgctcgccgacttccggtcgtacgcccgggccgaggttccc
ctcgacccgggcgtgacggccttcgtcgggcccaacggccagggcaagaccaacctggtc
gaggcgatcggctacgtcgccaccctgggcagccaccgggtcgccaccgacgccccgctg
atccggctgggcgccgaacgcgcggtgatccgcacctcggtggtggaccgcggccgctcc
accctggtcgagctggagctcaccccgggcaaggccaaccgggcccggatcaaccgctcc
gacaacgtccgcccgcgcgacgtactgggcctgctgcgcaccgtgctgttcgcccccgag
gacctcagcctggtcaagggcgatccgggcgagcgccggcgcttcctggacgagctgctg
accgcccgcgcgccccggctggccggggtccggcaggactacgagcgcgtgctcaagcag
cgcaacgccctgctgaagaccgccgcgatggcccgccgggccggcggcggcaagggcgcc
gacctgtccaccctggaggtctgggacggccatctggcccgcgccggagccgagttgacg
gccttccggatccagctggtggccgcgctgcagccgctggtgacggccgcgtacggccaa
ctggccccgggcggcggcgagaccgcgctggagtaccgcagctccttcgagggcgagctg
ccgaccagccgcgagcaggccgaggagcagctgctgcaggcgctgcaggcggtccgcaag
caggaggtcgagcgcgggatcaccctggtcggcccgcaccgcgacgagctggtgctcaag
ctcggcccgttgcccgccaagggctacgccagccacggcgagtcctggtcgttcgcgctc
gcgctgcggctggcctcgtacgagctgctgcgtgcggacggcggcgagccggtgctgatc
ctggacgacgtgttcgccgagctggacgccgcccgacgggaccggctggccgagctggtg
gccgacggcgagcaggtgctggtgaccgcggcggtggccgaggacgtgccgaaggcgctg
gcgggcgcccggttcgcggtctccgacggcgccgtccgccggatcgacgcctga
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