Streptomyces viridifaciens: CP971_17160
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Entry
CP971_17160 CDS
T06960
Name
(GenBank) PAS domain-containing protein
Organism
svr
Streptomyces viridifaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_4
PAS_9
PAS_8
Response_reg
HATPase_c
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QEV00758
LinkDB
All DBs
Position
complement(3939137..3942625)
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AA seq
1162 aa
AA seq
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MRYCRLRRSCPEPRRPVDVSSRPIRGAARLDAILDALPDALLLVNSNGTVVDANSAAVQA
LQAPGTSLVGMGVLGLLPEFDPSRIPGSMRPATRDGDALDRPVRMTAHRTDGTTFPVEVS
GNDFATDGGEGYGRSPYDPYRDGPRASSSSDLLLLLVRDLSGRLGVEAELRRQHKQTEMI
LRAAAEGVLGVDLEGRCVLVNPAAAHILEYRASELGGRELHPLIQHSRADGTPLALEESA
LLDTLTSGRKHRVRGTVLWRKDGRPVTVDLTTAPVRDGDQLVGAVMTFTDRSRELALIAR
NEHLTAVLESELGGALSALNQRLDRLAADPAGQLWPEANWTLRRLADECRRFGKLIDGVL
EHQRSEAGENGPAEGRDAKDGKTGRQAEQRVPVGLDKVVRRAVEEAGELVGPGRVRFSVH
AAAVEVIADKRRLAQALAHLVADVSGTGLSLDPPVAPSPGLAVPGLTTPGLGGPPTPATP
AEPPTVVLAAAQRGEVARVEIRGPGIGGSAVHLPIARAVVERHGGVLQPHELPGKAGTTY
VVELPLDPVAAKAAAERASAEGRSDRPKETDSAVLPELPGIPPLPSSGDVAEDTGSTPTA
AGAPAGPSGPDGPGDERPARAPEAEQAPTEEPPAERRGRRGRPAAGTPAPEAATPPAGPA
DQWPNAPARVERDVPEQWNGTGNDPAYGRRGLAAPQPPQSDPWGKDDGRSGPAYAVPVEG
ERPQQARPAGREPLALGPAPADAAQPGDAPTEDGAGTKPRRRRALPSAEDSSGGFALPGV
GDAPVYPGLEHALPTGPAPAPAEPAAAPTGRRRRLSVPPGPAADAPAGAPAPQPGGALEP
ARPALPSAEEQSGPRPVGSGLAELTPPRPAVTPVGTPPVPAVPAQPPVPVAPRPMAELPA
AGGERPDAEQSQPASGELANTRRLLVWPEPDPATGQALQSRGYLPVIVRSREEVDAQVAG
FPAALFVDPLTSPITRTALQSLRTAALNSRIPVLVTAGLGQATRDAAYGADPAVLLRALA
PRDGEHHAPRVLLVEGDPDIAAAMISSLERRGMHVEHAVDENDAVARASSVQPNLVVMDL
FQIRRRRVGLLDWLRANDRLHRTPLVVYTSVDLDPRELPRLRTGETVLFLAERSTSEDVQ
SRIVDLLGRIGAMGEAGVAAAG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagatactgccgactccggaggagctgccctgagccgaggagacctgtcgacgtgagc
agcaggccgatccgaggcgctgctcgcctcgacgccatactcgacgccctgcccgacgcg
ttgttgctggtgaacagcaacggcaccgtcgtggacgccaacagcgcggcggtccaggcg
ctgcaggcgccgggcacctcgctggtcggcatgggcgtgctcggcctgctgcccgagttc
gaccccagccgcatccccggctcgatgcgcccggccacccgcgacggcgacgccctcgac
cgcccggtccggatgaccgcccaccgcaccgacggcacgaccttcccggtcgaggtctcc
ggcaacgacttcgccaccgacggcggcgagggctacgggcgctccccgtacgacccctac
cgcgacggcccccgcgcctcctcgtcctccgacctgctcctgctgctggtccgcgacctc
tccggacggctgggcgtcgaggccgagctgcgccgccagcacaagcagaccgagatgatc
ctgcgggccgccgccgagggcgtgctcggcgtggacctcgaaggccgctgcgtcctggtc
aacccggccgccgcgcacatcctggagtaccgggcgagcgagctgggcgggcgcgaactg
cacccgctgatccagcactcccgggccgacggcaccccgctggcgctggaggagtccgca
ctgctggacaccctgacctccgggcgcaagcaccgggtgcgcggcaccgtgctgtggcgc
aaggacggccgcccggtcaccgtcgacctcaccaccgccccggtccgggacggcgaccag
ctggtcggcgcggtgatgaccttcaccgaccgcagccgcgaactcgccctgatcgcccgc
aacgagcacctcaccgccgtcctggagagcgagctcggcggcgcgctgagcgcgctgaac
cagcggctggaccggctcgccgccgaccccgccggacagctctggccggaggccaactgg
accctgcgccggctcgccgacgagtgccgccggttcgggaagctgatcgacggggtgctc
gaacaccagcgctccgaggccggcgagaacgggccggccgagggcagggacgcgaaggac
ggcaagaccgggcgccaggccgagcagcgggtgccggtcggcctggacaaggtggtccgc
cgggccgtcgaggaggccggcgagctggtcggccccggccgggtgcgcttctcggtgcac
gccgccgcggtcgaggtgatcgccgacaagcggcggctcgcccaggcgctggcccacctg
gtcgccgacgtcagcggcaccggcctctcgctggacccgcccgtcgccccctcccccggt
ctggccgtccccggcctgaccacgcccggactgggcggcccgcccaccccggccacgccc
gccgaaccaccgaccgtcgtcctggccgccgcccagcgcggcgaggtcgcccgggtcgag
atccgcggtcccggcatcggcggcagcgccgtccacctgccgatagcccgcgcggtggtc
gagcgccacggtggcgtgctccagccgcacgagctgcccggcaaggccgggaccacgtac
gtggtcgagctgccgttggacccggtcgccgcgaaggccgccgccgagcgcgcgtccgcc
gagggccgctccgaccggcccaaggagaccgacagcgccgtcctgcccgagctgccgggc
atccccccgctgcccagcagcggcgacgtcgccgaggacaccgggagcaccccgaccgcc
gccggcgccccggccggaccgagcggaccggacggcccgggcgacgaacggcccgcccgc
gcccccgaagccgagcaggcgcccaccgaggagcccccggccgagcgccgcggccgccgc
ggccgccccgccgccgggaccccggccccggaggccgccacccccccggccggccccgcc
gaccagtggccgaacgcccccgcccgggtggagcgggacgtccccgagcagtggaacggc
accggcaacgaccccgcgtacggccgccgcggcctggccgccccgcagccgccgcagagc
gacccgtggggcaaggacgacggccgttccggccccgcctacgccgtgcccgtcgagggc
gagcgcccgcagcaggcccggcccgccggccgggagccgctcgccctcggccccgcaccc
gccgacgccgcccagccgggcgacgcccccaccgaggacggcgccgggaccaagccgcgc
cgccgccgcgccctgccctccgccgaggactcgtcgggcggattcgcgctgcccggtgtg
ggcgacgccccggtgtaccccggcctggagcacgccctgcccaccgggccggcgcccgcc
ccggccgagcccgccgccgcgccgaccggccgccgccgccggctctccgtaccgcccggt
cccgccgccgacgccccggctggagcccccgccccgcagcccggcggtgcgctggaaccc
gcccggcccgcgctgccctccgccgaggagcagagcggcccgcgcccggtcggcagcggg
ctggccgaactcaccccgccgcgcccggcggtcaccccggtcggcaccccgccggtgccc
gccgtcccggcgcagccgccggtaccggtcgcgccgcgcccgatggccgaactgccggcc
gccgggggcgagcgcccggacgccgagcagtcgcagcccgcgtccggcgagctggccaac
acccgccggctgctggtctggcccgagcccgaccccgccaccggccaggcgctccagtcg
cgcggctacctcccggtgatcgtccgctcccgcgaggaggtggacgcccaggtggccggc
ttcccggcggcgctcttcgtcgacccgctgaccagcccgatcacccgcaccgcgctgcag
tccctgcgcaccgcggccctcaacagccggatcccggtgctggtcaccgcaggcctcggc
caggccacccgggacgccgcgtacggcgccgacccggccgtactgctgcgcgccctcgcc
ccgcgcgacggcgagcaccacgccccgcgggtgctgctggtcgagggcgacccggacatc
gccgccgcgatgatcagcagcctggagcggcgcggcatgcacgtcgagcacgcggtggac
gagaacgacgcggtcgcccgcgccagcagcgtccagcccaacctggtggtgatggacctg
ttccagatccgccgccgccgggtcgggctgctggactggctgcgcgccaacgaccggctg
caccgcaccccgctcgtggtctacacctcggtggacctcgacccgcgcgaactgccccgg
ctgcgcaccggcgagacggtgctgttcctggccgagcgctcgaccagcgaggacgtccag
tcccggatcgtcgacctgctcgggcggatcggcgcgatgggcgaggcgggcgtcgccgcc
gcgggctga
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