Streptomyces viridifaciens: CP971_17995
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Entry
CP971_17995 CDS
T06960
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
svr
Streptomyces viridifaciens
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svr03032
]
CP971_17995 (topA)
03400 DNA repair and recombination proteins [BR:
svr03400
]
CP971_17995 (topA)
Enzymes [BR:
svr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CP971_17995 (topA)
DNA replication proteins [BR:
svr03032
]
Prokaryotic type
DNA Topoisomerases
CP971_17995 (topA)
DNA repair and recombination proteins [BR:
svr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CP971_17995 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QEV00889
LinkDB
All DBs
Position
4115566..4118445
Genome browser
AA seq
959 aa
AA seq
DB search
MSPSSETAHGQRLVIVESPAKAKTIKGYLGPGYIVEASVGHIRDLPSTAAEVPDKYTGEV
RRLGVDVDHDFAPIYVVNADKKSQVSKLKSLLAESDELFLATDEDREGEAIAWHLQQVLK
PKVPVHRMVFHEITKTAIQEAVANPRELNQRLVDAQETRRILDRLYGFEVSPVLWKKVMP
KLSAGRVQSVATRLVVERERERMAFRTASYWDLVGTFGTGRTPADAANPETFGARLASVD
GKRIASGRDFGSDGRLKAGSTNTLHLDEQAARQLAAALAQTAFSVRSVESKPYRRSPYAP
FRTTTLQQEASRKLGFGAKRTMQVAQKLYENGFITYMRTDSTTLSDTAIAAARAQVTQLY
GADYLPDAPRTYASKVKNAQEAHEAVRPSGDRFRTPAETGLSGDDFRLYELIWMRTVASQ
MKDAVGQSVTVRVGGASADGRDVEFSASGKIITFHGFLKAYVEGADDPNAELDDRERRLP
QVAQGDPLAADRITPEGHATKPPARYTEASLVKELEDREIGRPSTYASIIDTIIQRRYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIAAGEAQSVPWLKRFYFGE
GEGAAGAAAEAGNGDGDHLGGLKELVTDLGAIDAREISSFRISEDITLRVGRYGPYVERA
SAVEGEPGQRADIPDELPPDELTVELAEELLAKPSGDFELGPDPVTGNMLVAKDGRYGPY
VTEILPEGTPKTGKNAVKPRTASLFKTMSLDTVTLEDALRLLSLPRVVGTDAEGAEITAQ
NGRYGPYLKRGTDSRSLTSEDQLFTITLEEALAIYAQPKQRGRAAAAPPLKELGTDPVSE
RPVVVKDGRFGPYVTDGETNATLRKDDDVETITPERGYELLAEKRARGPVKKAAKKAPAK
KAAAKKTTTTKTAATKTAAKKTAAKKTTTAKTATAKKTATKKAAAGKTAAGKAAATDEG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
gtgtccccgagcagcgagaccgcgcacggacagcgactcgtcattgtcgagtcgccggcc
aaggcgaagacgatcaagggctaccttggccccggctacatcgtcgaggcgagcgtcggg
cacatccgcgacctgcccagcaccgcggccgaggtgccggacaagtacaccggcgaggtg
cgccgcctcggagtggacgtcgaccacgacttcgcgcccatctacgtggtcaacgcggac
aagaagtcccaggtcagcaagttgaagtcgctgctcgcggagtccgacgagctcttcctc
gccaccgatgaggaccgcgagggcgaggccatcgcgtggcacctccagcaggtgctcaag
cccaaggtgccggtgcaccggatggtgttccacgagatcaccaagacggcgatccaggag
gcggtggccaacccgcgcgagctgaaccagcgcctggtcgacgcccaggagacccgccgc
atcctcgaccgcctctacggcttcgaggtctcgccggtgctgtggaagaaggtcatgccg
aagctgtcggcgggccgggtgcagtccgtggcgacccgtctggtggtcgagcgggagcgt
gagcggatggccttccgcaccgcctcgtactgggacctggtcggcaccttcggcaccggt
cgcacgccggccgacgccgccaacccggagaccttcggcgcccggctggcctcggtcgac
ggcaagcggatcgccagcggccgtgacttcggttcggacggccggctcaaggccggcagc
accaacaccctgcacctggacgagcaggccgcccgccagctggccgccgccctggcgcag
accgcgttcagcgtccgcagcgtcgagtccaagccctaccgccgctcgccgtacgcgccg
ttccgcaccaccacgctccagcaggaggccagccgcaagctgggcttcggcgccaagcgg
accatgcaggtggcccagaagctgtacgagaacggcttcatcacctatatgcgcaccgac
tccaccaccctgtcggacaccgcgatcgccgccgcccgcgcgcaggtcacccagctctac
ggcgcggactacctgccggacgccccgcgcacctacgccagcaaggtcaagaacgcccag
gaggcgcacgaggccgtccgcccctccggcgaccgcttccgcacccccgccgagaccggg
ctgagcggcgacgacttccggctgtacgagctgatctggatgcgcaccgtcgcctcccag
atgaaggacgcggtcggccagtcggtcaccgtccgggtcggcggcgcctccgccgacggc
cgggacgtcgagttctccgcctccggcaagatcatcaccttccacggcttcctcaaggcc
tacgtcgagggcgccgacgacccgaacgccgagctcgacgaccgcgagcgccggctgccc
caggtcgcccagggcgacccgctggccgccgaccggatcaccccggagggccacgccacc
aagccgccggcccgctacaccgaggcctcgctggtcaaggagctggaggaccgggagatc
ggccgtccctccacctacgcgtcgatcatcgacacgatcatccagcgcaggtacgtgttc
aagaagggcacggcgctcgtcccgtccttcctctccttcgccgtggtgaacctgctggag
aagcacttcggccggctggtcgactacgacttcaccgccaagatggaggacgacctcgac
cggatcgccgccggtgaggcgcagtccgtgccgtggctgaagcgcttctacttcggcgag
ggcgagggcgcggccggtgccgccgccgaggccggcaacggcgacggcgaccacctgggc
ggcctgaaggagctggtcaccgacctcggcgcgatcgacgcccgggagatcagctcgttc
cggatcagcgaggacatcaccctgcgggtcggccgctacggcccgtacgtcgagcgcgcc
tccgccgtcgagggcgagcccggccagcgcgccgacatcccggacgagctgccgccggac
gagctgaccgtcgagctggccgaggagctgctggccaagcccagcggcgacttcgagctc
ggcccggacccggtcaccggcaacatgctggtcgccaaggacggccgctacggcccgtac
gtgaccgagatcctgcccgagggcacgccgaagaccggcaagaacgcggtcaagccgcgc
accgcctcgctgttcaagacgatgtcgctggacaccgtcaccctggaggacgcgctgcgg
ctgctctcgctgccgcgcgtggtcggcaccgacgccgagggcgcggagatcaccgcgcag
aacggccgctacggcccgtacctcaagcgcggcaccgactcccgctcgctcaccagcgag
gaccagctcttcacgatcaccctcgaagaggcgctggcgatctacgcccagcccaagcag
cgcggccgggccgctgccgccccgccgctcaaggagctgggcaccgacccggtcagcgag
cgcccggtggtggtcaaggacggccggttcggcccgtacgtgaccgacggcgagaccaac
gccacgctgcgcaaggacgacgacgtcgagaccatcaccccggagcgcggctacgagctg
ctcgccgagaagcgggcccgcgggccggtgaagaaggcggcgaagaaggccccggcgaag
aaggcggcggccaagaagacgaccaccaccaagacggcggcgaccaagaccgccgccaag
aagacggccgcgaagaagaccaccaccgccaagacggcgacggcgaagaagacggccacg
aagaaggccgcggccggcaagaccgccgcgggcaaggccgccgccaccgacgagggctga
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