KEGG   Streptomyces viridifaciens: CP971_18855
Entry
CP971_18855       CDS       T06960                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
svr  Streptomyces viridifaciens
Pathway
svr03030  DNA replication
svr03430  Mismatch repair
svr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:svr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CP971_18855
   03430 Mismatch repair
    CP971_18855
   03440 Homologous recombination
    CP971_18855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:svr03032]
    CP971_18855
   03400 DNA repair and recombination proteins [BR:svr03400]
    CP971_18855
Enzymes [BR:svr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CP971_18855
DNA replication proteins [BR:svr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CP971_18855
DNA repair and recombination proteins [BR:svr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CP971_18855
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QEV01032
LinkDB
Position
4304445..4305191
AA seq 248 aa
MLPRPTPATSEALPGGRGFAVVDVEATGRSPWRHRVVEVAVVLLNERLRPEGEFATLLDP
LGPVGPTHVHRIRQADVEGAPRFREIAPRLLELLAGRVLVGHHVSCDHAFLDREFARIGV
PLPPVPVLCTMRLARAHLPEVRGYGLAACAEAAGLGWYPAHTALGDARVTAELLRHCVGE
PSCPPDDWAGPLREAARVPWPRLGRARSRPSGGPVPLLRREAPYGPWLPGSAAPELVLTQ
AGAMCSTA
NT seq 747 nt   +upstreamnt  +downstreamnt
atgcttccccgcccgacccccgcgacgtccgaagccctgcccggtggccggggcttcgcc
gtggtggacgtcgaggcgaccggccgcagcccgtggcggcaccgggtggtcgaggtggcg
gtggtgctgctgaacgagcggctccgccccgagggggagttcgccaccctgctggatccg
ctgggcccggtcggtccgacccatgtgcaccggatccgccaggcggacgtcgagggcgcc
ccgcggttccgggagatcgccccgcgactgctggagctgctggcgggccgggtgctggtc
ggccatcacgtcagctgcgaccacgccttcctggaccgcgagttcgcccggatcggggtg
ccgctgccccctgtcccggtgctgtgcacgatgcggctggcccgtgcccacctgccggag
gtccgcggctacgggctggcggcctgcgcggaggcggccggcctgggctggtacccggcg
cacaccgcgctcggcgacgcccgggtgaccgccgagctgctgcggcactgcgtgggcgag
ccgtcctgtccgccggacgactgggccggcccgctgcgcgaggccgcccgggttccctgg
ccgaggctgggccgggcccgttcccgcccgtccgggggccccgtcccgctgctgcgccgg
gaggcgccgtacggcccctggctgccgggttccgcggccccggagctcgtcctgacgcag
gccggtgctatgtgttcgacggcgtga

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