Streptomyces viridifaciens: CP971_20060
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Entry
CP971_20060 CDS
T06960
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svr
Streptomyces viridifaciens
Pathway
svr03420
Nucleotide excision repair
svr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP971_20060 (pcrA)
03430 Mismatch repair
CP971_20060 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svr03400
]
CP971_20060 (pcrA)
Enzymes [BR:
svr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP971_20060 (pcrA)
DNA repair and recombination proteins [BR:
svr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP971_20060 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CP971_20060 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
CarD_TRCF_RID
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QEV01239
LinkDB
All DBs
Position
4542196..4544820
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AA seq
874 aa
AA seq
DB search
MSSLFDDLPLPGFEAPAAGSKQPAVPADAIGEEPPPYEDELPYDAYEEAIPEGLFHTDHA
AEAERDAWYRNGAARTVVDPAQLLEGMNDPQREAVLHAGSPLLIVAGAGSGKTRVLTHRI
AHLLGARGVQPGEILAITFTNKAAGEMRERVEALVGPRARAMWVSTFHSACVRILRRESK
QLGFTSSFSIYDSADSQRLMSLVCRDLDLDPKQFPPKSFTAKVSNLKNELIDEETFADQA
ANPMEKKLAEAYALYQRRLREANALDFDDIIMTTVNLLQAFPDVAEHYRRRFRHILVDEY
QDTNHAQYMLVRELSGGSVAAAPKRTADGDFVNPAAGRLAEVPPAELCVVGDADQSIYAF
RGATIRNILQFEEDYPNATTILLEQNYRSTQTILSAANAVIERNANRREKKLWTAGDHGE
KVVGYVADDEHGEAQFIADEIDRLTDQGEAKPGDVAIFYRTNAQSRVFEEVFIRVGLPYK
VVGGVRFYERKEVRDVLAYLRVLSNPEDTVPLRRILNVPKRGIGERAEAMIDALAARERI
SFAQALVRVDEAYGLAARSANAVKKFNTLMAGLRQVVESGAGPAAVLEAVLEETGYLAEL
QASTDPQDETRVENLKELASVALEYEQDPGERPDAGDDGAPPVGSLADFLERVALVADSD
QIPDEDEEGQGVITMMTLHTAKGLEFPVVFLTGMEDGIFPHMRALNQVKELEEERRLAYV
GLTRARERLYLTRSVLRSAWGQPAYNPASRFLEEIPETLVEWKRTGAAQAPVQRGFSSGS
SWGKSSPGGGSSRSSSSAAASPKAGWGQSARRPGKVVDREVVALAVGDRVTHDTFGLGTV
TGVTGVGDNAQAEVDFGSGGRKRLVLRYAPVEKL
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcctctttgacgacctcccgctccccggtttcgaggcacccgccgccgggtcg
aagcaacccgccgtgcccgccgacgcgatcggcgaggagcccccgccgtacgaggacgag
cttccgtacgacgcgtacgaggaggcgatcccggaggggctgttccacaccgaccatgcc
gcggaggccgagcgggacgcctggtaccgcaacggcgccgcccggacggtggtggacccg
gcgcagctgctggaggggatgaacgacccgcagcgcgaggccgtcctgcacgccggctcg
ccgctgctgatcgtggccggcgccggctccggcaagacccgggtgctgacccaccggatc
gcccacctgttgggcgcccgcggggtgcagccgggcgagatcctggcgatcaccttcacc
aacaaggccgccggcgagatgcgcgagcgcgtcgaggcgctggtcggcccgcgcgcccgg
gcgatgtgggtgtccaccttccacagcgcctgcgtgcggatcctgcgccgcgagtccaag
cagctgggcttcacctccagcttctcgatctacgactcggccgactcccagcggctgatg
tcgctggtctgccgcgacctcgacctggacccgaagcagttcccgccgaagtccttcacg
gcgaaggtcagcaacctcaagaacgagctgatcgacgaggagaccttcgccgaccaggcc
gccaacccgatggagaagaagctcgccgaggcgtacgcgctctaccagcggcggctgcgc
gaggccaacgcgctggacttcgacgacatcatcatgacgacggtgaacctgctgcaggcc
ttccccgacgtcgccgagcactaccggcgccggttccggcacatcctggtcgacgagtac
caggacaccaaccacgcccagtacatgctggtccgggagctgagcggcggatccgtcgcg
gccgcgcccaagcgcaccgcggacggggacttcgtgaacccggccgccgggcggctggcc
gaggtgccgccggccgagctgtgcgtggtcggtgacgcggaccagtcgatctacgccttc
cgcggcgcgaccatccgcaacatcctccagttcgaggaggactacccgaacgcgaccacg
atcctgctggagcagaactaccgctccacccagaccatcctgagcgccgccaacgccgtc
atcgagcgcaacgccaaccggcgcgagaagaagctctggacagccggcgaccacggcgag
aaggtcgtcggctacgtcgcggacgacgagcacggcgaggcccagttcatcgccgacgag
atcgaccggctcaccgaccagggcgaggccaagcccggcgacgtcgcgatcttctaccgc
accaacgcccagtcccgcgtgttcgaggaggtgttcatccgggtcggcctgccgtacaag
gtggtcggcggggtgcgcttctacgagcgcaaggaggtccgggacgtcctggcgtacctg
cgggtgctctccaacccggaggacaccgtgccgctgcgccggatcctcaacgtgcccaag
cgcggcatcggcgagcgggccgaggcgatgatcgacgcgctggccgcgcgggagcggatc
tccttcgcccaggcgctggtgcgggtggacgaggcgtacgggttggctgcgcgctcggcc
aacgccgtcaagaagttcaacaccctgatggccgggctgcgccaggtcgtcgagtcgggc
gcgggcccggcggcggtgctggaggccgtcctggaggagaccggctacctggccgaactc
caggcctccaccgacccgcaggacgagacccgggtggagaacctcaaggagctcgcctcg
gtggcgctggagtacgagcaggatccgggcgagcggccggacgccggggacgacggcgcg
ccgccggtcggctcgctggccgacttcctggagcgggtcgcgctggtcgccgactccgat
cagatcccggacgaggacgaggaggggcagggcgtcatcacgatgatgaccctgcacacc
gccaagggcctggagttcccggtggtcttcctgaccggcatggaggacgggatcttcccg
cacatgcgggcgctcaaccaggtcaaggagctggaggaagaacgccggctcgcgtacgtg
gggctcacccgggcccgcgagcggctctacctgacccgctcggtgctgcgcagcgcctgg
gggcagccggcctacaacccggcctcgcgcttcctggaggagatcccggagacgctggtc
gagtggaagcggacgggggccgcgcaggcgccggtccagcgcggcttctcctcgggttct
tcctggggcaagtcctcgcccgggggcgggagttcgcgttcttcgtcctcggctgcggcc
tcgccgaaggcgggctgggggcagtcggcccggcgccccggcaaggtcgtggaccgcgag
gtcgtcgcgctcgcggtgggcgaccgggtcacccacgacacctttgggctgggcacggtg
acgggcgtgacgggcgtcggcgacaacgcgcaggccgaggtggacttcggctccggcggc
cgcaagcggctggtcctgcggtacgcgccggtcgagaagctctga
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