Streptomyces viridifaciens: CP971_24785
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Entry
CP971_24785 CDS
T06960
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
svr
Streptomyces viridifaciens
Pathway
svr03030
DNA replication
svr03430
Mismatch repair
svr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP971_24785
03430 Mismatch repair
CP971_24785
03440 Homologous recombination
CP971_24785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svr03032
]
CP971_24785
03400 DNA repair and recombination proteins [BR:
svr03400
]
CP971_24785
Enzymes [BR:
svr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CP971_24785
DNA replication proteins [BR:
svr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CP971_24785
DNA repair and recombination proteins [BR:
svr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CP971_24785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
B1
Motif
Other DBs
NCBI-ProteinID:
QEV02028
LinkDB
All DBs
Position
5602359..5605892
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDQPFAHLHVHTEYSMLDGAARLKQMFKEVERLGQTHVAMTDHGNMYGAAEFHKQATDA
GITPVIGIEAYVAPESRSNTKRVLWGQPHQKKDDVSASGAYTHKTIWARNKEGLHNLFKL
TSRSYAEGWLVKWPRMDKELISELSGGLMATTGCPSGEVQTRLRLGQFDEAVKAAADYQD
IFGKENYFLELMDHGLEIEKRVRDGLLEISRKLNIPPVVTNDSHYTTEADAAAHDLLLCV
QTGKNLSDPDRFRFDGTGYYIKSAAEMYALDSSDAWQEGCRNSQLLVASRVDTEGMFKFK
NLMPRFPIPEGFESEAEFFRSKVWEGMDWRFPNGYDEEHRKLAEYEMDTIIQMGFPAYFL
VVADFIMWAKSQGIAVGPGRGSAAGSLVAYAMGITDLDPIPHGLIFERFLNPERISMPDV
DIDFDERRRGDVIRYVTEKWGSDKVAMIVTYGTIKAKAAIKDSSRVLGYPYAMGDRITKA
MPPDVMGKGIPLSGITDPTHPRYSEAGEIRGLYENDPDVRKVIDTARGIEGLIRQPGVHA
AGVIMSAEPLTDHIPVWTRHTDGVTITQFDYPTCEGLGLLKMDFLGLRNLTIMDDAVKAI
EKNKGIKINLLELPLDDKPTYELLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLA
LYRPGPMGVNSHTNYALRKNGQQEITPIHPELEKPLEEVLRPTYGLIVYQEQVQKAAQIL
AGYSLGQADLLRRAMGKKKKEILEAEFVPFQKGCRERGYSDAAIQAVWDVLVPFSGYAFN
KAHTAGYGLVSYWTAYLKANYPAEYMSGLLTSVKDDKDKSAVYLNECRKMGIQVLPPDVN
ESDSDFTPHGSDTVRFGLTAIRNVGGPVVESMIRTRKAKGKFSSFPDFLEKVESVVCNKR
TVESLIKAGAFDSLGHTRKGLSAQFEPMIDNVVGVKRKEAEGQFDLFGGDATSDEPGFGL
DVVFSEEEWDKSFLLTQEREMLGLYVSSHPLHGIEHVLADKSDCAVADLAERPDGSIVTI
GGIISGLQRKMTKQGNAWAIATVEDLAGSIDCMFFPASYQLVSSQLVEDAVVFVRGKLDK
REDVPRLMGMELSVPDLSNAHAEAPITINIPSGKVTPPLIARLSEVLTHHKGTTEVRVRL
EGRAKTTVLRLDRHRVKSDPALFGDLKQLLGPSCLAG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaccagccgttcgcgcacctgcacgtccacaccgagtactcgatgctggacggt
gccgcccggctgaagcagatgttcaaggaggtcgagcggctggggcagacccatgtcgcg
atgaccgaccacgggaacatgtacggcgccgccgagttccacaagcaggcgaccgacgcg
gggatcactccggtgatcggcatcgaggcgtacgtcgcgcccgagtcccggtcgaacacc
aagcgcgtcctgtggggccagccgcaccagaagaaggacgacgtctcggcgtccggcgcg
tacacccacaagaccatctgggcccggaacaaggagggcctgcacaacctcttcaagctg
acctcgcgctcgtacgccgagggctggctggtgaagtggccccggatggacaaggagctg
atctccgaactgtccggcgggctgatggccaccaccggctgcccctccggtgaggtgcag
acccggctgcggctcgggcagttcgacgaggccgtgaaggccgccgccgactaccaggac
atcttcggcaaggagaactacttcctggagctcatggaccacggcctggagatcgagaag
cgggtccgcgacgggctgctggagatcagcaggaagctgaacatccccccggtggtcacc
aacgactcgcactacaccaccgaggccgacgccgctgcccacgacctgctgctctgcgtg
cagaccggcaagaacctctcggacccggaccgcttccgcttcgacgggaccggctactac
atcaagtccgccgccgagatgtacgcgctggactcctcggacgcctggcaggagggctgc
cgcaacagccagctgctggtcgcctcccgggtcgacaccgagggcatgttcaagttcaag
aacctgatgccccgcttcccgatcccggagggcttcgagtccgaggcggagttcttccgg
tccaaggtctgggagggcatggactggcgcttcccgaacgggtacgacgaggagcacagg
aagctcgccgagtacgagatggacaccatcatccagatggggttcccggcgtacttcctc
gtggtcgcggacttcatcatgtgggccaagagccagggcatcgcggtgggcccgggccgt
ggttcggcggccggttcgctggtcgcgtacgcgatgggcatcaccgacctcgaccccatc
ccgcacggcctgatcttcgagcgcttcctcaaccccgagcgcatctccatgcccgacgtc
gacatcgacttcgacgagcgccggcgcggtgacgtgatccgctacgtgacggagaagtgg
gggtccgacaaggtcgccatgatcgtcacgtacggcaccatcaaggcgaaggccgccatc
aaggactcctcccgggtcctcggctacccctacgcgatgggcgaccggatcaccaaggcg
atgccgccggacgtcatgggcaagggcatcccgctgtccggcatcaccgacccgacgcac
ccccgctacagcgaggcgggcgagatccgggggctgtacgagaacgacccggacgtgcgg
aaggtcatcgacaccgcacgcggcatcgagggcctgatccgtcagcccggcgtgcacgcg
gccggcgtgatcatgtccgcggagccgctgaccgaccacatcccggtctggacccggcac
accgacggcgtcaccatcacgcagttcgactaccccacctgtgagggcctcggccttctg
aagatggacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaaggcgatc
gagaagaacaagggcatcaagatcaaccttcttgagctgcccctcgacgacaagcccacc
tacgaactcctcgcccgcggcgacacgctgggcgtcttccagctcgacggcgggccgatg
cgctcgctgctgcggctgatgaagcccgacaacttcgaggacatctcggccgtcctcgcg
ctgtaccgcccgggcccgatgggcgtcaactcccacacgaactacgcgctgcgcaagaac
ggccagcaggagatcaccccgatccacccggagctggagaagcccctggaggaggtgctc
cggcccacctacggcctgatcgtctaccaggagcaggtgcagaaggccgcgcagatcctg
gccggctactcgctcggccaggccgacctgctgcgccgcgcgatgggcaagaagaagaag
gagatcctggaggcggagttcgtccccttccagaagggctgccgcgagcgcggctactcc
gacgcggccatccaggcggtgtgggacgtcctggtccccttctccggctacgcgttcaac
aaggcgcacaccgccgggtacgggctggtctcgtactggacggcgtacctcaaggccaac
tacccggccgagtacatgtccggcctgctcacctccgtcaaggacgacaaggacaagtcg
gcggtctacctcaacgagtgccgcaagatgggcatccaggtgctgccgccggacgtcaac
gagtcggactccgacttcacgccgcacggcagcgacaccgtccggttcggcctgaccgcc
atccgcaacgtcggcgggccggtggtcgagtcgatgatccgcacccggaaggccaagggg
aagttcagctccttcccggacttcctggagaaggtggagtcggtggtctgcaacaagcgg
accgtcgaatcgctgatcaaggccggggcgttcgactcgctcgggcacacccgcaagggc
ctgagcgcgcagttcgagccgatgatcgacaacgtcgtcggggtcaagcgcaaggaggcc
gaggggcagttcgacctcttcggcggcgacgccacctcggacgagcccggcttcgggctg
gacgtcgtcttctccgaggaggagtgggacaagtccttcctgctcacccaggagcgggag
atgctcggcctgtacgtctcctcgcacccgctgcacggcatcgagcacgtgctcgccgac
aagtcggactgcgcggtcgccgacctcgccgagcggccggacggctcgatcgtcaccatc
ggcggcatcatctcgggcctccagcggaagatgaccaagcagggcaacgcctgggcgatc
gccaccgtcgaggacctggcgggctccatcgactgcatgttcttcccggccagctaccag
ctggtctcctcccaactggtcgaggacgccgtggtgttcgtgcgcggcaagctcgacaag
cgggaggacgtgccgcggctgatgggcatggagctgtccgtcccggacctgtcgaacgcc
cacgccgaggcgccgatcaccatcaacatcccgagcgggaaggtcaccccgccgctgatc
gcccggctcagcgaggtgctgacccaccacaagggcaccaccgaggtgcgggtacggctg
gagggccgcgccaagacgacggtgctccggctggaccggcaccgggtgaagtcggacccg
gccctgttcggcgacctgaagcagctgctcgggccgagctgcctggccggctag
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