Streptomyces viridifaciens: CP971_28975
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Entry
CP971_28975 CDS
T06960
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svr
Streptomyces viridifaciens
Brite
KEGG Orthology (KO) [BR:
svr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svr03021
]
CP971_28975
Transcription machinery [BR:
svr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP971_28975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_37
HTH_23
GerE
MarR
HTH_Tnp_4
MarR_2
FlhD
Motif
Other DBs
NCBI-ProteinID:
QEV02726
LinkDB
All DBs
Position
6485580..6486458
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AA seq
292 aa
AA seq
DB search
MTTRTEAPAPAARPADTTNAIRRHVAPELAGVDSPRDVAPSDARELTRMLLRRLAALEEG
TREYSYVRSTLIELNLSLVRYVIRRFDAQREPQEDLLQVGAVGLIKAIDRFDPDRDVEFS
TFAIPTVLGEIRRHFRDTTWAVHVPRRLQELRIALAKAQDDLTTRLDRAPTVAELAGHLR
LSEEEVIEGLTAANARTTGSLDFGSADDDESGSPLADRLGQEDAAIDLTENLVALKPLIA
RLSTREQLILSLRFTDELTQSQIGARLGLSQMHVSRLLTRTLKKLRDGLNAA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcgaaccgaagcacccgcgccggccgcccggccggccgacaccacgaacgcc
atccgccgccacgtcgcgccggaactggccggcgtggacagcccccgcgacgtcgcgccc
tcggacgcgcgggaactcacgcggatgctgctgaggcggctcgcggccctcgaagagggc
acccgcgagtactcctacgtccgctcgaccctgatcgagctcaacctgtccctcgtccgc
tacgtgatccgacgcttcgacgctcagcgcgagccccaggaggacctgctccaagtcggt
gccgtcggcctgatcaaggcgatcgaccggttcgatcccgaccgtgacgtggagttctcc
accttcgccatcccgaccgtcctgggcgagatccgccgccacttccgcgacaccacctgg
gcggtccacgtcccccgccggctccaggaacttcgcatcgccctcgccaaggcccaggac
gacctcacgacacggctcgaccgtgcaccgaccgtcgccgaactcgccggtcacctccgc
ctgtccgaggaggaggtgatcgagggcctcacggccgccaacgcgcgcaccacgggatcc
ctcgacttcggcagcgccgatgacgacgagagcggcagccccctcgccgaccgcctcggc
caggaggatgccgcgatcgacctcaccgagaacctcgtggcactcaaacccctcatcgcc
cgactttccacgcgcgaacagctcatcctctccctgcgcttcaccgacgaactgacccag
tcacagatcggcgcacggctcggcctgtcccagatgcacgtctcccgactgctcacccgt
accctgaagaaactgcgggacggcctgaatgccgcgtga
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