Setaria viridis (green foxtail): 117833039
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Entry
117833039 CDS
T07951
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00061
Fatty acid biosynthesis
svs00071
Fatty acid degradation
svs01100
Metabolic pathways
svs01212
Fatty acid metabolism
svs04146
Peroxisome
Module
svs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117833039
00071 Fatty acid degradation
117833039
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117833039
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svs01004
]
117833039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117833039
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117833039
Lipid biosynthesis proteins [BR:
svs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117833039
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of breast milk
117833039
Exosomal proteins of breast cancer cells
117833039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117833039
NCBI-ProteinID:
XP_034568290
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All DBs
Position
8:4202965..4208192
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AA seq
697 aa
AA seq
DB search
MNPYFFGFILPFVASLLLTKRKSEKKRGVPVDVGGEPGCAVRNHRFERPVESHWEGVSTL
AELFEQSCEQFAYMPLYGTRKLIARELEVAPDGRSFEKLHLGNYEWKSYADAFKTVCNFA
SGLLRVGHLKDERVAIFADTRAEWQIALQACFRQNIAVVTIYSSLGEGALCHSLNETEVT
TVVCGRKELKKLVDISGQLDTVKHVIYINEEGVSTEVSLAEKCTSWTIKSFEEVESLGLE
RPVEANLPLPSDTAVIMYTSGSTGMPKGVMMSHRNVLAVVSAVMTIVPYLGKKDVYLAYL
PLAHILELAAEAIITGVGASIGYGSPLTLTDTSNKIKKGTRGDASALKPTLMTAVPAILD
RVRDGVRKNVDAKGGLAKKLFNIAYSRRLAAVNGSWLGAWGLEKLLWDMLVFQKVRAILG
GRIRFILAGGAPLSGDTQRFINICLGAPISQGYGLTETCAGGTFSEYDETSVGRVGPPLP
CSYIKLIDWAEGGYLTTDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDERGMRWFYS
GDIGRLHPDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALSVCPYVDQIMIHADPFHSYCV
ALVVAAHSELKGWASKQGITYRDFADLCQKQQIVKEVLQSLAKAAKQARLEKFEIPAKIK
LIPEPWTPESGLVTAALKLKREIIKKAYEKDLAQLYS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctatttctttggtttcattctcccttttgttgcgtctctgctgctcaccaag
aggaaatctgagaagaagaggggagtgccggtcgatgtgggtggagagcctgggtgcgcc
gtccgcaaccacagatttgaacggcccgtcgaatcgcactgggaaggggtttccacgctt
gctgagctatttgagcaatcatgcgagcagttcgcctacatgcccctatatggcaccagg
aagctcattgcaagggagttggaggtggctcctgacgggaggtcctttgagaagcttcat
ttggggaactatgagtggaaaagctatgctgatgcattcaagactgtgtgcaactttgct
tctggcctactgagagttgggcatctgaaggatgagcgtgttgctatttttgctgatact
cgggctgagtggcagattgcgttgcaggcgtgcttcagacaaaacattgcagttgtcaca
atctattcctctttgggggagggagcgctatgtcactcactaaatgagactgaggtaact
actgttgtctgcggacggaaggaactgaaaaagctggttgatataagtgggcaacttgac
actgtgaaacatgtcatctacattaatgaagaaggtgtatcaactgaagtatccttggct
gaaaaatgcactagctggaccattaagtcatttgaggaggtagagagcttaggactggaa
aggcctgttgaagcaaacttgcctcttccatcagatactgcagtgattatgtatacaagt
ggcagcacaggaatgcctaagggagtcatgatgagccaccgcaatgtcttggctgtagtt
tcagctgttatgaccattgtgccttatcttggcaagaaggatgtgtatctggcatacctt
ccactagcacatatccttgaattggcagctgaggcaatcataactggtgttggggcttca
ataggatatggatcacctttgaccctgactgatacatccaataaaataaaaaaggggact
cgaggtgatgcttctgcactgaagccaacactaatgactgctgtacctgctatacttgat
cgtgttcgtgacggtgtacgaaaaaatgtagatgcaaagggtgggttagcaaagaaatta
tttaatatcgcctacagccgtcgtctagctgctgttaatggaagctggttgggtgcatgg
ggactagagaagctcttgtgggatatgcttgtctttcagaaagttcgtgcaatcttggga
ggaaggattcgctttatccttgcagggggggcacctttgtcaggggacactcagagattt
atcaatatatgtcttggggctccaatatcgcaaggatatggtctgactgaaacttgtgct
ggtgggacattttcagagtatgatgaaacgtccgttggccgtgttggtcctcctctgcct
tgttcatacattaagttgatagactgggctgaaggtggatacttaacaactgattcacca
atgcctcggggtgaaatagttattggaggtccaaatgtaactaaaggctacttcaaaaat
gaagcaaaaacaaatgaagtctacaaggatgatgaaagaggcatgcggtggttctactct
ggtgacattgggcgcttgcacccagatggctgtattgaaatcatcgaccgtaagaaggac
attgtcaagcttcaacacggtgaatatgtatctctaggaaaggtggaggcagctttgagt
gtgtgcccatatgttgaccagatcatgatccatgctgaccccttccacagctactgtgtc
gcccttgttgtagctgcacacagtgagctgaaaggctgggcctcaaaacaaggaatcacg
tatcgtgattttgcagatttgtgccagaagcaacagattgtcaaagaagtcctccaatct
ttggcaaaggctgctaaacaagcgcgactggagaagtttgagatcccagccaaaatcaag
ctcataccggagccatggacgccagagtcaggcctcgttacggctgccctcaagctcaag
agggagataattaagaaggcatacgagaaggaccttgcccagttgtacagctag
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